Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0470 |
Symbol | |
ID | 5453647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 512376 |
End bp | 513008 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640876036 |
Product | ThiJ/PfpI domain-containing protein |
Protein accession | YP_001411750 |
Protein GI | 154250926 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCCCA TAAACGCGAA GAGCCGCACC ATCGGCATCC TGATTTTCGA CGGTGTCGAG GAGCTCGATT TCGTCGGCCC CTATGAAGTC TTCACCATGT CGAACGAAGT CTACGGCCAT GAAGGCCGCG AGCATCCCGA CAAGGTGATC CTGATTTCGG AAACGGGCGG GCCCGTCACG GGCGCGAAGG GTATGCGCGT CGAGGCTCAT GCGGGCATCG CCGATATGGA AAAACTCGAC CTCCTGCTTG TCCCTGGCGG CATCGGCACG CGCCGTGAAG CGGGCAACAA GAGCCTGCTC GGCTGGATTG CGAAAGTTGC CCCTGCCTGC GAATGGGTCA CAAGCGTCTG CACCGGCGCG CTCCTTCTCT GCGTTGCCGG TCCCGCGAAG GGAAAGCGCG TCACCACCCA TTGGGGTTTC ATCGAAACGC TCCGCGCGCG CGGCGAGGCA TCCGAGGTCA TCGAAAACAT CCGCTATGTG CGCGATGGCA ATGTCGTCAC CGCGGCGGGC GTCTCCGCCG GCATCGACAT GGCGCTCTGG GTCGTCGGCC AGATGCATGG AGCAGATCAC GCCCGCAAGA CGCAGCGCGC AATGGAATAC GATCCCGCCC CGCCTTACGC CGCCGCCGTT TGA
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Protein sequence | MSPINAKSRT IGILIFDGVE ELDFVGPYEV FTMSNEVYGH EGREHPDKVI LISETGGPVT GAKGMRVEAH AGIADMEKLD LLLVPGGIGT RREAGNKSLL GWIAKVAPAC EWVTSVCTGA LLLCVAGPAK GKRVTTHWGF IETLRARGEA SEVIENIRYV RDGNVVTAAG VSAGIDMALW VVGQMHGADH ARKTQRAMEY DPAPPYAAAV
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