Gene Plav_0461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0461 
Symbol 
ID5454095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp498266 
End bp498790 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content61% 
IMG OID640876027 
ProductMerR family transcriptional regulator 
Protein accessionYP_001411741 
Protein GI154250917 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0313707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGC AGGTTCATGC CGCCTCCAGT GACGCGCTCC GGCGCAATGG CGGCGACGTC 
GCAAGCGCCG GTACCACATT TTCGATAACC GAACTTGCCG ATGAGTTCGG CCTCACCACC
CGGGCCATCC GCTTTTACGA GGACAAGGGG CTCCTGTCGC CGGAGCGTCG CGGCCAGTCC
CGCATCTATT ATCCGCGTGA CCGCGCCCGC CTCACATTGA TCGTGCGCGG CAAGAACGTC
GGTCTCGCCT TGAACGAAAT CAAGGAAATC CTGAGCCTTT ACGATCAGCA TGATGGCTGC
GAAACGCAGA ACCGTGTCGC CGTGGACAAG TTCCGCCGGC GCATTGCCAT GCTTCGTCAG
CAGCGCAACG AAATCGACCT GCAGATTAAG ACGCTGGAAG ACAGCTGCGC CCGCCTCGAA
GCGCAGATCG TGGAGCAGGT GAAGGCCGGC AAGGCGACGG AGGCGGCTCC GAAAGCTGCC
GCAAAAAGGA CGAGCACCAA AAAGCCCGAA AAGGCTATCG TCTAG
 
Protein sequence
MEQQVHAASS DALRRNGGDV ASAGTTFSIT ELADEFGLTT RAIRFYEDKG LLSPERRGQS 
RIYYPRDRAR LTLIVRGKNV GLALNEIKEI LSLYDQHDGC ETQNRVAVDK FRRRIAMLRQ
QRNEIDLQIK TLEDSCARLE AQIVEQVKAG KATEAAPKAA AKRTSTKKPE KAIV