Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0461 |
Symbol | |
ID | 5454095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 498266 |
End bp | 498790 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640876027 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001411741 |
Protein GI | 154250917 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0313707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACAGC AGGTTCATGC CGCCTCCAGT GACGCGCTCC GGCGCAATGG CGGCGACGTC GCAAGCGCCG GTACCACATT TTCGATAACC GAACTTGCCG ATGAGTTCGG CCTCACCACC CGGGCCATCC GCTTTTACGA GGACAAGGGG CTCCTGTCGC CGGAGCGTCG CGGCCAGTCC CGCATCTATT ATCCGCGTGA CCGCGCCCGC CTCACATTGA TCGTGCGCGG CAAGAACGTC GGTCTCGCCT TGAACGAAAT CAAGGAAATC CTGAGCCTTT ACGATCAGCA TGATGGCTGC GAAACGCAGA ACCGTGTCGC CGTGGACAAG TTCCGCCGGC GCATTGCCAT GCTTCGTCAG CAGCGCAACG AAATCGACCT GCAGATTAAG ACGCTGGAAG ACAGCTGCGC CCGCCTCGAA GCGCAGATCG TGGAGCAGGT GAAGGCCGGC AAGGCGACGG AGGCGGCTCC GAAAGCTGCC GCAAAAAGGA CGAGCACCAA AAAGCCCGAA AAGGCTATCG TCTAG
|
Protein sequence | MEQQVHAASS DALRRNGGDV ASAGTTFSIT ELADEFGLTT RAIRFYEDKG LLSPERRGQS RIYYPRDRAR LTLIVRGKNV GLALNEIKEI LSLYDQHDGC ETQNRVAVDK FRRRIAMLRQ QRNEIDLQIK TLEDSCARLE AQIVEQVKAG KATEAAPKAA AKRTSTKKPE KAIV
|
| |