Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0454 |
Symbol | |
ID | 5453400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 489409 |
End bp | 490125 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640876020 |
Product | putative ICC-like phosphoesterase |
Protein accession | YP_001411734 |
Protein GI | 154250910 |
COG category | [R] General function prediction only |
COG ID | [COG1407] Predicted ICC-like phosphoesterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGACC TGATAGAAAA AGAACCCCGC ATCGAAACGC AGCCCTCGCT CCGCGTCTGC GGCGTCACGC TCGGTCTCAT GCCCGAGGGC GCGGGCTGGT GGGCGGACGA GCGCCTGCTC GTCGTCGCCG ATCTCCATCT CGAAAAAGGC TCCGCCTTCG CCGCGCGCGG CATCGTCCTC CCGCCCTACG ACACGCGCGC CACGCTCGCG CGCCTCGAAG CCCTCATTGA AAAATTGAAA CCGCGCACAA TCGTCGCCCT CGGCGACAGC TTCCATGATC GCGCCGCCGC CTCGCGCATG GACGCATCCG ACGCCGCGCA TCTGACGCGC CTTGCAAAAA ATCTCGACTG GGTCTGGATC GCCGGAAATC ACGATCCGGT TCCCCCGCGC GAATTCGGCG GCACCGTGAT GGAAGAACTC AATCTCGGTC CGCTCACCTT CCGCCACGAG CCGAGAGGGG CGCCTTCGAC GGGCGAGATC GCCGGCCATC TCCACCCCTG CGCCGCCGTC CGCGTCCGTG GCCGCCGCCT CCGCCGCCGC TGCTTCGCCT CCGACGGCAC GCGGGTCATC CTCCCCGCCT TCGGCGCCTA TGCCGGGGGC CTCAACGTCC TCGACGCGGC TTATGAAAAT CTTCTCCCCG GTTTCGATTT CCATGCCTGG ATGATGGGCG CAAGAACAGT TATCCCCGTC TCCGCCCGCC GCCTCGAAGG CGATTGA
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Protein sequence | MYDLIEKEPR IETQPSLRVC GVTLGLMPEG AGWWADERLL VVADLHLEKG SAFAARGIVL PPYDTRATLA RLEALIEKLK PRTIVALGDS FHDRAAASRM DASDAAHLTR LAKNLDWVWI AGNHDPVPPR EFGGTVMEEL NLGPLTFRHE PRGAPSTGEI AGHLHPCAAV RVRGRRLRRR CFASDGTRVI LPAFGAYAGG LNVLDAAYEN LLPGFDFHAW MMGARTVIPV SARRLEGD
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