| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0453 |
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| Symbol | |
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| ID | 5455222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 486776 |
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| End bp | 489331 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640876019 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001411733 |
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| Protein GI | 154250909 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.293341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGC CGGCCCCCGC CCCGAAGGAA GACCCGCAAG CCGCCATCCT CCCGCCCGCC
TTCACCCATT GGTTCGAGGC GCGCGGCTGG CGCCCCCGCG TGCATCAGCT CGCGCTGGCC
GGCCTCGCGC GCGAAAAGAA ATCGACGCTC CTCATCGCGC CCACAGGCGC GGGCAAGACG
CTCGCCGGCT TCCTCCCGAC ACTGGTCGAC CTCGCCACAA ACCCGCGCAA AGCCCGCAAG
CTCCACACGC TCTATATCTC GCCGCTCAAG GCCCTCGCTG TCGACGTGAA GCGCAATCTC
GAAATGCCCG TCGCCGAAAT GGGCCTCGAC ATCTCCATCG AAACCCGCAC CGGCGACACG
CCGCAAAACC GCCGCCTCCG CCAGCGCCGA GAGCCGCCCG ACATATTGAT GACGACGCCC
GAGCAACTGG CGCTCCTGCT GTCCTATCCC GATGCGCGGG ATTTCTTCGG CGCGCTCGAC
TGCGTCGTGC TCGACGAGCT GCATGCGCTG GCGAATTCCA AGCGCGGCGA TCTTCTCGCC
CTCGGCCTCG CGCGCCTGTC GCGTCTCGCG CCCGGCCTCC GCCGGGTCGG CCTCTCCGCC
ACCGTGGCCG AGCCGGACGA GCTCCGCCGC TACCTCATGC CCCAGCCCGC GGAAGGCGAA
AGCTTCAGCG AGATCATCGT CGCCCCGCCC GGCGCCGTGC CGGAAATAGC GGTGCTGACG
CCAATGGAAA GCGAAACGGA GGAGGGCGAG GGCCGCATTC CCTGGTCCGG CCATTCCGCG
CGCCACGCGC TCCCCGCCGT CTACGAAGCG ATCCGCGCGA ACCGTATCGT CCTCGTCTTC
GTCAACACGC GCAGCCAGGC CGAATTCGTC TTCCAGGAAT TGTGGCGCCT GAACGAAGAT
GCGCTCCCCA TCGCCCTCCA TCACGGCTCG CTCGCGGCGG AAGCGCGCCG CAAGGTGGAG
GCCGCCATGT CGGCGGGCTC GCTCCGCGCC GTCGTCTGCA CCTCGACGCT CGATCTCGGC
ATCGACTGGG GCGAGGTTGA TCTCGTGGTG AACATGGGCG CACCCAAGGG TGCAAGCCGT
CTCCTCCAGC GCATCGGCCG CGCCAATCAC CGTCTCGACG AGCCATCCCG CGCGCTTCTC
GTCCCCGCAA ACCGCTTCGA GGTGCTCGAA TGCGAGGCCG CCCGCGCCGC CGCGCTGGAA
GGCGCGCAGG ATGGCATGGT CGCGCGGCTG GGCGCGCTCG ACGTTCTGGC GCAACACATC
CTCGGCTGCG CCTGCTCCGA ACCTTTCGAC CCGGATGATC TCTACACGGA GGTAATATCC
GCCGCCCCTT ACCGCGCTCT CCCCCGCGAT GATTTCGGCA AGGTGGTCGA TTTCGTCGCC
ACCGGCGGCT ATGCCCTGAA AAACTACGAC CGCTTCGCAA GGCTCAGGCC CAACGCGAAG
CACGAAGGCG ATATGCGGCT GCGCGCCGCC TCGCCTTCCG TCATCCAGCA ATACCGAATG
AATGTCGGCA CCATCGTCGA GGCGCCGATG TTGAAGGTCC GCATGATAAA AAGCCGCGGC
CGCCGCCCGG TGGGCAGCAT GGGCGGGCGC TATTTGGGCG AGATCGAGGA ATATTTCATC
GACCAGCTCT CGCCCGGCGA CACATTCCTC TTCGCCGGTC ACGTCCTTCG CTTTGAGGGG
CTGGCCGAAA CGGAAGCCCT CGTCACGAAG TCGAACGCCG CCGAGCCGAT GATCCCGTCC
TACTACGGCG GCAAGTTTCC ACTCTCCACC TATCTCGCCG CCCGCGTCCG CACCATGCTC
GCCCATCGCG AACAATGGTC GGCGCTCCCG CCGCAAGTCC GCGAATGGCT GGAGATACAG
GCCTGGCGCT CCGTCCTTCC CGGCGAACAC AATCTGCTGG TCGAGTGTTT TCCGCGCGGC
GACCGCTACT ATCTCGTCTG CTATCCCTTC GAGGGCCGCC TCGCGCATCA GACCCTCGGC
ATGCTACTCA CCCGCCGCCT CGACCGCGCC GGCGCGCGGC CCTTGGGTTT CGTCGCCTCG
GAATATTCGC TCGCCATCTG GTGCCTGCGC GATCCCGGCC TCATGCACGA GCGCCATGAA
CTGCCGCTTG GCGAACTCTT TGGCGAAGAC ATGCTGGGCG ACGATCTCGA CGCATGGCTC
GCCGAATCGA GCCTGCTGAA GCGCACCTTC CGCGATTGCG CCATAATATC GGGCCTCATC
GAGCGCCGTT ATCCGGGCAT GGAGAAGACC GGCCGCCAGG TCACCTTCTC ATCCGACCTC
ATCTATAATG TCCTGCGCGA GCACGAGCCG GACCACATCC TCCTCCGCGC GACATATAAT
GACGCCGCCA CCGGCCTCCT CGACGTCGCC CGCGTCGCCG AAATGCTGAA GCGCGTGAAG
ACCCGCATCA CCCTGAAGCG CCTCGACCGC GTCTCGCCCT TGGCCGTCCC CGTCCTCCTC
GACATCGGCA AGGTCCAGAT CGACGGCGAA GCGAACGAAG CCTTGCTGGC CGAAGCGAGA
GACAGTCTGA TAGAAGAAGC GACAAGGCTG GTTTGA
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| Protein sequence | MTKPAPAPKE DPQAAILPPA FTHWFEARGW RPRVHQLALA GLAREKKSTL LIAPTGAGKT
LAGFLPTLVD LATNPRKARK LHTLYISPLK ALAVDVKRNL EMPVAEMGLD ISIETRTGDT
PQNRRLRQRR EPPDILMTTP EQLALLLSYP DARDFFGALD CVVLDELHAL ANSKRGDLLA
LGLARLSRLA PGLRRVGLSA TVAEPDELRR YLMPQPAEGE SFSEIIVAPP GAVPEIAVLT
PMESETEEGE GRIPWSGHSA RHALPAVYEA IRANRIVLVF VNTRSQAEFV FQELWRLNED
ALPIALHHGS LAAEARRKVE AAMSAGSLRA VVCTSTLDLG IDWGEVDLVV NMGAPKGASR
LLQRIGRANH RLDEPSRALL VPANRFEVLE CEAARAAALE GAQDGMVARL GALDVLAQHI
LGCACSEPFD PDDLYTEVIS AAPYRALPRD DFGKVVDFVA TGGYALKNYD RFARLRPNAK
HEGDMRLRAA SPSVIQQYRM NVGTIVEAPM LKVRMIKSRG RRPVGSMGGR YLGEIEEYFI
DQLSPGDTFL FAGHVLRFEG LAETEALVTK SNAAEPMIPS YYGGKFPLST YLAARVRTML
AHREQWSALP PQVREWLEIQ AWRSVLPGEH NLLVECFPRG DRYYLVCYPF EGRLAHQTLG
MLLTRRLDRA GARPLGFVAS EYSLAIWCLR DPGLMHERHE LPLGELFGED MLGDDLDAWL
AESSLLKRTF RDCAIISGLI ERRYPGMEKT GRQVTFSSDL IYNVLREHEP DHILLRATYN
DAATGLLDVA RVAEMLKRVK TRITLKRLDR VSPLAVPVLL DIGKVQIDGE ANEALLAEAR
DSLIEEATRL V
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