| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0444 |
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| Symbol | |
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| ID | 5455670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 479000 |
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| End bp | 479662 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876010 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001411724 |
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| Protein GI | 154250900 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.275459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGACGACTG ATCTGGATGA GGCGCCCGCC GAGGCGTCCA AAAAGCCGAA GGCGCCCGGC
AAGCGCGAAC TCACCAAGCA GAACAACCGT GAAGCCATTC TCGAGGCGGC GAAGGTCGTC
TTTTCCGATC TCGGCTACGG CGCCACATCG GTGCGCGACA TCATCCGCAA GACCGGCCTC
GCATCGGGCA CCTTCTACAA TTATTTCAAG AGCAAGGAAG AAGTCTTCGA GGCGCTGATG
GATGAGGGCA TGCGCCGCAT CCGTCCGCGC CTCCGCGCCG AGCGCATCCG CTCGCGCACT
TTCGAGGATT TCATCCGCAA CGCCTTCCGC ACCTATTTCG ATTACCTCGC CACCGACCGC
GACACCTTCC AGGTCATGCG CCGCAATCCG AACACGGTGC GCGTCCGCAT GGATTCGCCG
GAAATCATCG CCGGCTTCGA GGAAATCCGT GAGTATATCG AAGAAGACAT CCGCAACGGC
ACCCTGCCGG CGGTGGATGC GGAATATCTG ATGGCCGCTG TGGTCGGCCT CGCGATGGAA
ATGGGCGACC GCATGCTGCG CCGCCCGGAA ATGGACGCCG AGCACGCCTC CGCCTTCGCC
ACCGCCCTCG TCCTCGGCGG CTTTCGCGCC CTCCCTCACG CAGGAAACAA GGGCAAGCCG
TAG
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| Protein sequence | MTTDLDEAPA EASKKPKAPG KRELTKQNNR EAILEAAKVV FSDLGYGATS VRDIIRKTGL
ASGTFYNYFK SKEEVFEALM DEGMRRIRPR LRAERIRSRT FEDFIRNAFR TYFDYLATDR
DTFQVMRRNP NTVRVRMDSP EIIAGFEEIR EYIEEDIRNG TLPAVDAEYL MAAVVGLAME
MGDRMLRRPE MDAEHASAFA TALVLGGFRA LPHAGNKGKP
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