| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0439 |
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| Symbol | |
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| ID | 5457040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 474386 |
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| End bp | 475702 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640876005 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001411719 |
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| Protein GI | 154250895 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGG CGGCGGCGCG GGTGAACCAT CGCAAGGTTC TTGCCATCGC CATTCCCATC
GTCATTTCCA ACATCTCGAC GCCGCTGCTC GGCATTGCCG ATACGGCGGT GATGGGGCGG
ATGGGCGATC CGAAATATAT CGGCGCGGTG GCCATCGGCG CGCTCATCTT CACCATGGTC
TACTGGACCT TCGGCTTTCT GCGCATGGGG ACGACGGGGC TTACCGCGCA GGCGCTGGGC
GCGATGGATG GCGAGGAAAT CCGCGCTTCG CTCGGGCGGG CGCTGCTGAT TGCCGGGGCG
GTGGGCGCGG CGCTGATCCT CATGCAATGG CCGATAGGCT TTGCCGCTTT CGCACTGCTC
GACGGCAGAG AGGAAGTGGA GAGCCTCGCG CGCGTCTATT TCGACATCCG CATATGGAGC
GCGCCTTTTG CGCTGGCGAA TTATGCGCTG GTCGGATGGT TCATCGGGCT CGGGCGCGCG
AATATCGCGC TGGCGCTGCA GGTGTTCCTC AACCTCGTCA ACATCTTCTT CAACATCGCG
CTGGCGCTGG GGCTCGGCTG GGGCGTGGCG GGGATTGCGG CGGGAACGCT GATCGCGGAA
GTGGCGGCGG CGCTTGCCGG GCTTGCGGTG GCGGCGCGGC ATTTGCGGTT CTATCCGGGG
CAATGGACGC GGGCGCGGCT CCTCGATGCG GCGCGGCTGG CGCGGACGGT CGCGGTCAAT
CGCGACATCA TGATCCGCAC CATCGTGCTG ATGTTTTCCT TCGCGTGGTT CACGGCGAAG
AGCGCCGAGG CGGGCGCGGT GACGCTGGCC GCCAATTCGA TCCTGCTGCA ATTCGTGACG
GTGAGCGCCT TCTTTCTCGA CGGTTTCGCG CTGGCCGCCG AGGCGCTGGT GGGCAAGGCT
TTCGGCGCGC GCAGCCGCGA GGATTTCGAT CTTTCGGCGC GGCTTTCGAC CGCCTGGGCG
GCGGGGATCG CGTGTACATT GTCGCTCGGG ATTTTCGCGT CTGGCGGTTT CGTCATCGAC
TTCCTCACCA TCGATGAGGA AGTGCGCGCG GCGGCGCGGG TCTATCTCTT CTGGGCGGCG
CTGCTGCCGG TGCTGTCGGT CTGGTGCTAC CAGCTCGACG GGATATTCAT CGGCGCGACA
CGCGGGACCG AGATGCGGAA CGCGGCGCTG GCATCGAGCG CGCTGTTCCT GACGCTCTGG
TGGCTGCTGC TGCCTTACGG CAATCACGGG CTGTGGGCGG CGCTTGCGGG CTTCAACCTG
ATGCGGGCGG CGTCGCTCGG ATTTTACTAT CCGCGACTGA GGCGGGCGCT GGCGTGA
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| Protein sequence | MSEAAARVNH RKVLAIAIPI VISNISTPLL GIADTAVMGR MGDPKYIGAV AIGALIFTMV
YWTFGFLRMG TTGLTAQALG AMDGEEIRAS LGRALLIAGA VGAALILMQW PIGFAAFALL
DGREEVESLA RVYFDIRIWS APFALANYAL VGWFIGLGRA NIALALQVFL NLVNIFFNIA
LALGLGWGVA GIAAGTLIAE VAAALAGLAV AARHLRFYPG QWTRARLLDA ARLARTVAVN
RDIMIRTIVL MFSFAWFTAK SAEAGAVTLA ANSILLQFVT VSAFFLDGFA LAAEALVGKA
FGARSREDFD LSARLSTAWA AGIACTLSLG IFASGGFVID FLTIDEEVRA AARVYLFWAA
LLPVLSVWCY QLDGIFIGAT RGTEMRNAAL ASSALFLTLW WLLLPYGNHG LWAALAGFNL
MRAASLGFYY PRLRRALA
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