Gene Plav_0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0426 
Symbol 
ID5454942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp460007 
End bp460564 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content63% 
IMG OID640875992 
Productputative phosphohistidine phosphatase, SixA 
Protein accessionYP_001411706 
Protein GI154250882 
COG category[T] Signal transduction mechanisms 
COG ID[COG2062] Phosphohistidine phosphatase SixA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.407898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAC TTTGCCTTAT GCGCCATGCG AAATCGGACT GGAGCGACCC TGCCAACGAT 
GATTTCACAC GGCCGCTCAA CGCGCGTGGC ACGACCGCGG CGGCATTCAT GGCACGGTAT
ATCGCGGCAT CGCCCTACCG GCCGGACGCC GTTCTTTGTT CGACCGCAGC GCGCGCAACG
CAAACCTGCA TGCCGCTTTG CGACGCGCTC GGCCCCAACG TGCCGGTGGT TTACCGCGAT
GAGCTTTATC ACGCGATGCC GGACACGATG CTCACCGAAA TCCGGCGCGT GCCGGCCAAT
GTGGAAACGC TGCTTGTGGT CGCCCATAAT CCGGGGCTGG TGCTGCTCGC AATGGCGCTT
GCCGAGGACC CGGACGATGA AACGGCGCTG CGCATCGCGC ATGGCGTGCC GACGGGCGGC
TTCATTGTCA TCGATTTCGA TATCGACGCC TGGACGGATA TCAGGGAGAA CGCGGGCCGT
CCCGAATTCT TCGTCAGACC GCGCGACCTG ATGACCGAGG GGGCCGAAGG AAAAAGCGGG
ACAAGCGCGG GTCAGTAA
 
Protein sequence
MKRLCLMRHA KSDWSDPAND DFTRPLNARG TTAAAFMARY IAASPYRPDA VLCSTAARAT 
QTCMPLCDAL GPNVPVVYRD ELYHAMPDTM LTEIRRVPAN VETLLVVAHN PGLVLLAMAL
AEDPDDETAL RIAHGVPTGG FIVIDFDIDA WTDIRENAGR PEFFVRPRDL MTEGAEGKSG
TSAGQ