| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0420 |
|---|
| Symbol | |
|---|
| ID | 5454333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 451873 |
|---|
| End bp | 452595 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640875986 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001411700 |
|---|
| Protein GI | 154250876 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.744091 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCA TTACACACGC AGTCCACAAG GCCAACCCCG CAAAGGACCA AAGTCCGCGT
TCCGCGCGGG GCTTTTGCTC ATATAAACCA CACAGAAAGA GGCTCTCCGT GCGCAGCTTT
GTTTTCTCTG CTTTTGCGGC CGCACTGCTA TTTGCCGGTC AACCGGCATC TGCCGTCACG
CTGACGCCGC CCGACACCGG ATACAGCGCC ACGCGGATCG TGAACGCGTC AGGACGGGAA
ATTTCCGGGC AGCTTTATTC CGAGAACGGA AATGAACGCT GGGAGATGAC GATGCAGGGC
ATGCGTCAGG TTTCCATTTT GCGGCATGGC GAAGGCCGCA TGTTTCTCTA CATGCCGGAT
ATGAACATGG CGATGGAAAT GGGCCAGGAG GAAGCGGCAA ATTACGGCGT CGAAAAATTG
CTCGGCGGCG TCGAGGCGGA AGAAATCGGC CGCGAGACGG TCGAGGGTGA GGCCACCACG
AAATATCGCG TGCTGCCGGG ACAGACGGCG CAGAAAGGCG ACGCGACGAT CTGGGTGACG
GAAGACGGCA TACCGGTCAA GGCGGAGGGA TCGAGCGCGC AGGGAAATTT TTCGATGCGG
CTGACGAACC TGCAGCGCGG ACCTCAGGAC CCGGGACTGT TCGAGCTGCC CGCCGGTGTC
TCGGCGATGA AGATGCCTCA GGGAATGCCC GGTGGAACGA TGCCCGGAAT GCCGCTGCCC
TGA
|
|---|
| Protein sequence | MNSITHAVHK ANPAKDQSPR SARGFCSYKP HRKRLSVRSF VFSAFAAALL FAGQPASAVT
LTPPDTGYSA TRIVNASGRE ISGQLYSENG NERWEMTMQG MRQVSILRHG EGRMFLYMPD
MNMAMEMGQE EAANYGVEKL LGGVEAEEIG RETVEGEATT KYRVLPGQTA QKGDATIWVT
EDGIPVKAEG SSAQGNFSMR LTNLQRGPQD PGLFELPAGV SAMKMPQGMP GGTMPGMPLP
|
|---|
| |