| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0416 |
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| Symbol | |
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| ID | 5456164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 448510 |
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| End bp | 449373 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640875982 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001411696 |
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| Protein GI | 154250872 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGA GCAAACCCGC ACCTCAACCC CAGGAACAAA GCCATCAGCC CGGCAGTGAA
GAGGAGATGC ATCCAGCGCC CGATTACATG CCGCGCTTTC CCGGCTCCGG GCGATTGAAG
GGAAAGGCCG CGATCATCAC GGGTGGCGAT TCCGGCATCG GGCGCGCAAC GGCCATTCTG
TTTGCCCGCG AAGGCGCGAA GGTCGGCTTT CTCTACAAGG ACGAAACGGA AGGGGAAGAC
GCGCAGGAAA CCATCGAACG CATCAAGGCC GAAGGCGCCG AATGCTTTTC CATGGCGGGA
GACGTCGGCG ACAAATCCGT GGCCGAAGCC TTTGTCGCGG AGGCGCTGAA AAAATTCGGC
AGGCTCGATG TGGTGGTGAA CGGTGCTGCT GAACAGCACC ACCGGCCGGA GATGACCGAC
ATTCCCGAAG AACAGATGGA GCGGACTTTC CGCACCAACA TCTTTGGCTG CTTCCACATC
ATCCAGGCGG CGTTGCCTCA TCTGAAGCGC GGCGCGTCGG TCATCTGCAT CACCTCGGTC
ACCGCCTATC GCGGGCAACC GGCATTGCTC GACTATTCCT CGACCAAGGG GGCCGTGCTC
GCGCTTGTCC GGGCGCTCTC CTCCAATCTG GCGGACAAAG GCATTCGCGT GAACGGCGTC
GCGCCCGGCC CGATCTGGAC ACCGCTTATT CCTGCCTCCT TCCCCGAGGA CAAGGTTGCG
GAGTTCGGCA AGAGCGCGCC GCTCGGGCGC CCGGGGCAGC CGAATGAAGT GGCGCCCTCG
CTTCTCTTCC TCGCTTGCGA GGACGCGTCA TACATGACGG GGCAGGTGCT CCATCCGAAT
GGCGGCGATC TGATTGGAGG CTGA
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| Protein sequence | MSQSKPAPQP QEQSHQPGSE EEMHPAPDYM PRFPGSGRLK GKAAIITGGD SGIGRATAIL
FAREGAKVGF LYKDETEGED AQETIERIKA EGAECFSMAG DVGDKSVAEA FVAEALKKFG
RLDVVVNGAA EQHHRPEMTD IPEEQMERTF RTNIFGCFHI IQAALPHLKR GASVICITSV
TAYRGQPALL DYSSTKGAVL ALVRALSSNL ADKGIRVNGV APGPIWTPLI PASFPEDKVA
EFGKSAPLGR PGQPNEVAPS LLFLACEDAS YMTGQVLHPN GGDLIGG
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