| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0412 |
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| Symbol | |
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| ID | 5455072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 444769 |
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| End bp | 445494 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640875977 |
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| Product | LrgB family protein |
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| Protein accession | YP_001411692 |
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| Protein GI | 154250868 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.579768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGACA TCGGTTTCCG CTTCATCTAT TGGGAGCATG TACCGGAAGG CGCGTTCTGG
ATCGCGCTGA CGCTCGCGCT TTATCTTCTC GCTCGCAAGA TCCAGCAGAT GGCAGGCGGC
AGCCCGCTCG CGAACACGGT GCTGCTGCCC GCGCTGCCGA TCATCGCGCT GCTCTGGTTC
GCGGATATCC ATATCGGCAG TTACGAGATG GGCGGGCAGG TTCTGCTCTG GCTGCTCGGA
CCGGCAACGG TAGCGATCGC GGTGCCGCTC TATCTGAACT TCGCCCGGGT GCGCTCGGCG
CTGCTTCCCA TGGTTGTCTC GCTCGCCGTC GGTTCAACGG TCGCCGTTAT TTCCGCCATT
GTCATCGGCG AGGCGATGGG GGCGAGCATT GATACGATCC GTTCGCTCGC GCCCAAATCC
GTAACAACCC CAATCGCGAT GGGCATCGCC GGAGAAATCG GCGGACTGCC ATCGCTCACC
GCCGCTTTCG TCATCATCAC GGGAATTATC GGGGCCGTCT TCGGCGCGGC CTTCTTCAAC
CTGCTCCGCA TCCGCGACCG CCGCGCCCGC GGCTTTGCAA TGGGAATAGC CGCTCATGGC
ATCGGCACGG CGCGGGCCTT TCAGGAAGAC GAAGTAACGG GAACCTTCTC TGGCATCGCG
ATGGCGCTGA ACGGCATCGT GACGGCGCTT CTTCTGCCCG CGCTCTGGTT TTTCTTCGCG
AGTTGA
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| Protein sequence | MSDIGFRFIY WEHVPEGAFW IALTLALYLL ARKIQQMAGG SPLANTVLLP ALPIIALLWF
ADIHIGSYEM GGQVLLWLLG PATVAIAVPL YLNFARVRSA LLPMVVSLAV GSTVAVISAI
VIGEAMGASI DTIRSLAPKS VTTPIAMGIA GEIGGLPSLT AAFVIITGII GAVFGAAFFN
LLRIRDRRAR GFAMGIAAHG IGTARAFQED EVTGTFSGIA MALNGIVTAL LLPALWFFFA
S
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