| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0407 |
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| Symbol | |
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| ID | 5455873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 439907 |
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| End bp | 441085 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640875972 |
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| Product | acetylornithine deacetylase (ArgE) |
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| Protein accession | YP_001411687 |
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| Protein GI | 154250863 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCGC CGCACTATTT CACCCCCCGG GAAATGATCG AGAGGCTCAT CGCCTTCGAT
ACGACGAGCC ATCTCTCGAA CCTCGCGCTC GTCGATTTCG TGGAAAGCTA TCTCGCAAGC
CACGGCGTCG CTTCAAGGCG GGTGATGAAC GAGGACGGCA CCAAGGCCAA TCTCTTCGCG
ACCCTCGGCC CCGCCGATCA GCCCGGCGGC ATCGTGCTTT CAGGTCATAC GGATGTCGTG
CCCGTGGAAG GCCAGGACTG GTCGAGCGAT CCCTTCCTTG TGGTGGAGCG GGACGGCAAG
CTCTATGGGC GCGGCACCAG CGATATGAAA AGTTTCATCG CCGTGGCGCT TGCTTCCGTG
CCCGCCTTTC TGAAGGACGG GCCGAAAGTG CCGGTCCATT TCGCGCTTTC CTATGACGAG
GAAGTCGGCT GCCTCGGCGT TCGTCCGATG ATCGAGAGCA TCATCCGTAC CCTGCCGAAG
CCGCAGGTCG TCATTGTCGG CGAGCCCTCC TCCATGAAGG TCGTGAACGC GCATAAGGGC
ATCCAGTCCT ACAATACCAA GGTGACGGGC CTCGAATTCC ATTCGAGCCA GACGCATCTC
GGGGTGAGCG CCATTCAATA TGCGGCAGAG CTTATTTCTT TCCTGATGCA ACTCGCCGGC
GAGATGCGCG AGCGCGGCGA TGCTTCGGGC CGGTTCAGTC CGCCCTACAC CACGATCAGC
GTCGGCCTCA TCAAGGGCGG CACCGCCGTC AACATCATTC CGAAGAGCTG TTCCTTCCTC
TGGGAATACC GCCCGCTGCC GGATGCCGAT CCCTCCGAAA TCATCACGCG GTTCAATGCC
TTCGCGGCGG AAGACGTGCT GCCGCGCATG CGCGCCGTCT TTCCGGGCGC GCAGATCGAA
ACGGTAACGC GGGCGCAATC TCCCGGCCTC GGCGCCATGG ATGGCGATCC CGGCGAGACG
CTGGTGATGA AGCTCGCGCA ATGCAATTCG GCCGAGGCGG TTTCCTACAA TACGGAGGCG
GGGCTTTTTC AGCTCGCCGA TATTCCGACC GTCGTTTGCG GCCCGGGCGA CATCGCGCAG
GCGCACAAGC CGGATGAATT CGTGGAATTG TCGCAGATCG CCGAATGCGA GCGCTTCATG
AAGCGGCTGG CAGACTATGT GTCAGGCCGG CCGGTTTAA
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| Protein sequence | MPAPHYFTPR EMIERLIAFD TTSHLSNLAL VDFVESYLAS HGVASRRVMN EDGTKANLFA
TLGPADQPGG IVLSGHTDVV PVEGQDWSSD PFLVVERDGK LYGRGTSDMK SFIAVALASV
PAFLKDGPKV PVHFALSYDE EVGCLGVRPM IESIIRTLPK PQVVIVGEPS SMKVVNAHKG
IQSYNTKVTG LEFHSSQTHL GVSAIQYAAE LISFLMQLAG EMRERGDASG RFSPPYTTIS
VGLIKGGTAV NIIPKSCSFL WEYRPLPDAD PSEIITRFNA FAAEDVLPRM RAVFPGAQIE
TVTRAQSPGL GAMDGDPGET LVMKLAQCNS AEAVSYNTEA GLFQLADIPT VVCGPGDIAQ
AHKPDEFVEL SQIAECERFM KRLADYVSGR PV
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