Gene Plav_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0406 
Symbol 
ID5453354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp439463 
End bp439924 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content60% 
IMG OID640875971 
ProductBLUF domain-containing protein 
Protein accessionYP_001411686 
Protein GI154250862 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTCC AGCTCGCCTA TTTCAGCGCC GTCAGGCCGA AACTGACCGA CGAAGACGTG 
CGGGATATTC TGCGCAGCTC CACGCATAAT AATCGCCGCT GCGGGCTGTC GGGCATGCTG
CTTCTCATCG ATGGCGTGTT TTTTCAGGTT CTCGAAGGCG AACAGGCGCA GGTGGAGGAA
ACCTTCGTCC GAATCTCCCG CGATCGCCGC CATAGCGGCC TGGTCCGCGT GGTGGCGGAG
GAGCGCGCGG AGCGCAGCTT TCCAAACTGG TCGATGGGCT TCGAGAAAAT CTCCCATGGC
GATCCCGCCG GGGAGGAACT CCCCTTCGAC ATTGCCGATC TTTCGCAAAA TCCGGCCATT
CTTTCGGCGG GAGAAAAGTC GCCGGAGCTT TTGTCCTTCA TGAGATCGCT TTATGCCGCG
CGCAACATGC GCGGTGCGCC GGGCTTAAAC CGGCCGGCCT GA
 
Protein sequence
MIFQLAYFSA VRPKLTDEDV RDILRSSTHN NRRCGLSGML LLIDGVFFQV LEGEQAQVEE 
TFVRISRDRR HSGLVRVVAE ERAERSFPNW SMGFEKISHG DPAGEELPFD IADLSQNPAI
LSAGEKSPEL LSFMRSLYAA RNMRGAPGLN RPA