Gene Plav_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0400 
Symbol 
ID5454211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp433586 
End bp434101 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content72% 
IMG OID640875965 
ProductGcrA cell cycle regulator 
Protein accessionYP_001411680 
Protein GI154250856 
COG category[S] Function unknown 
COG ID[COG5352] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.800641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGACCG ATGAACGCGT GGAACTGCTG AAGAAGCTCT GGGCCGAAGG CCTGAGCGCC 
AGCCAGGTCG CCAAGCAGCT CGGCGGCGTG ACCCGCAATG CGGTGATCGG CAAGGTGCAT
CGCCTCGGAT TGTCAGGCCG CGCCACGCCC AGCCGCCCTG CCCGCTCGCG CGCCCCGGCG
CCCCGCACGC TGGTGCGCGG CCGTCCGGAC CCGCTGACGG CGGAAGCGCG CGGCGACGAG
CGCCAGCGCG AGGCGGCGGC CGAGCGCGCC GAAGCCGCCC ATGTCGAGGA ACGCGGCCTC
GAGCCGATCC AGCGCGCGAC CGTCCTCACC CTCACGGAAC ATACCTGCAA ATGGCCGATC
GGCGATCCGG GCCGGCCGGG CTTTCATTTC TGCGGCCGGG GTGCCGAACA TGGCGCGCCC
TACTGCACCG AACATGCGCG CATGGCCTAT CAGCCGGCGC AGGCGCGGCG GAACCGCGAG
CGCGACCGGA TGCGCAGGGA CCGGCTGGTA AGCTGA
 
Protein sequence
MWTDERVELL KKLWAEGLSA SQVAKQLGGV TRNAVIGKVH RLGLSGRATP SRPARSRAPA 
PRTLVRGRPD PLTAEARGDE RQREAAAERA EAAHVEERGL EPIQRATVLT LTEHTCKWPI
GDPGRPGFHF CGRGAEHGAP YCTEHARMAY QPAQARRNRE RDRMRRDRLV S