| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0388 |
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| Symbol | |
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| ID | 5454826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 419684 |
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| End bp | 420433 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640875953 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001411668 |
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| Protein GI | 154250844 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.190078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGGTG GGGTAGCTAA GTCCCCCCTT GCCCTCCCTA ATGCCCTTCA TTACGCTGCC
GGTATGAGTA AACTTGACAG CCCCGACAAG ACCTCCCGGC GCGGCGATAC GCGCGCGCGT
TTGATGGAGG CGGCCGAGCG CCTGTTTGGC GAGCGGGGGC TTCATGCCGT CACGCTGAAG
GAGATCAACG CCGAAGCCGG CCAGCGCAAC GAGTCCGCGC TGCATTATCA CTTCGGCTCC
AAGCAGCGTC TGGTCCAGGC CATTCTCGAT GCCCGCGTCG GCGCCATCGA CAAGCGCCGC
GCGGCGCGCA TCGACGCGCT CATCGAGGCG GGCGGCGCGG ACGACCTCCA CGCGATCCTG
CGCGCGACCT TCGAGCCGCT CACCGGCCTT CTCGACACGG AGGAGGGCGT GCGCTTTGTG
CGCTTCGCGG CGCAGGTGCT CAACGATCCC GATTTCGATC TGCCGACGGT GGCGCTCCGC
AGCGGCTTCC AGGGCATCAC GCGCGCCAAC GCGCTCATTA TTTCGGTGCT CGCCGAGCTG
CCGCCCGAAA TCGCCATCCA GCGCCAGCGC CTGATGATCG AAATGGCGCT CACCTCGCTC
GCCATCTGGA CCCGCCGTCC CGACGCAACG GCGAACGCCG CGGCCCGCGC CTTCTTCGTC
GCCTCCCTCT TCGACGCCAT AGCCGGCGCC CTCACAGCCC CCGTCTCCGA AGAAACGCTG
GCGGCGCTGA AGGAAGCCTC GAAAAATTAA
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| Protein sequence | MAGGVAKSPL ALPNALHYAA GMSKLDSPDK TSRRGDTRAR LMEAAERLFG ERGLHAVTLK
EINAEAGQRN ESALHYHFGS KQRLVQAILD ARVGAIDKRR AARIDALIEA GGADDLHAIL
RATFEPLTGL LDTEEGVRFV RFAAQVLNDP DFDLPTVALR SGFQGITRAN ALIISVLAEL
PPEIAIQRQR LMIEMALTSL AIWTRRPDAT ANAAARAFFV ASLFDAIAGA LTAPVSEETL
AALKEASKN
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