| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0385 |
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| Symbol | |
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| ID | 5456051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 415033 |
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| End bp | 417222 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640875950 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001411665 |
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| Protein GI | 154250841 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.530219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCG AAAACGCCCC CGCCTCCTGC TGCCACACCC ATGGCCATGC CCACGCCCAC
ACGCCGAAGC CCGCCGCCCC CGGCAGCAAA TATACCTGCC CCATGCACCC GGAGATCGTG
GCGGACGGTC CCGGTTCCTG CCCCATCTGC GGCATGGCGC TGGAACCCAT GACCGTCTCG
CGCGACAAGC CCGAGAATGA AGAGCTGAAG GACATGACGC GCCGGTTCTG GGTCGCTGCC
ATCCTCGCAG CTCCCCTCTT CGCCATGGAA ATGGGCAGCC ACCTCCTCGG CCTCCACATC
CCCTTGAGCC CCGCCGCCTC CGGCTGGCTG CAACTGGCGC TGGCGACGCC CGTGGTCCTC
TGGGCGGGCT GGCCCTTCTT CGTCCGTGGC CTCGCCTCGC TCCGCACCAT GAACCTCAAC
ATGTTCACGC TGATCGCCAT GGGCACCGGC GCGGCTTATG TCTATTCGCT CGCCGCCATC
CTCGCCCCCG GCATTTTCCC GCCCGCCTTC CGCGATGCGC ATGGCGCCGT GCCGCTCTAT
TTCGAGGCCG CCGCAATCAT CACCGTCCTC GTCCTGCTCG GCCAGGTGCT GGAACTCCGC
GCCCGCGAGC GCACCGGCGA CGCGCTCCGC GCCCTTCTCG ACCTTGCCCC CCGCACCGCC
CGCCGTGTCG TGAATGGCGC GGATGAAGAA GTCCCCCTCG AAGAAATCGC GAAAGGCGAC
ACACTCCGCG TCCGCCCCGG CGAGCGCGTC CCCGTCGATG GCGAACTGAT CGAAGGCCGC
AGTGCGGTCG ATGAATCCAT GATCACCGGC GAACCGCTCC CCGTCGAAAA GGAACCCGGC
GCCCGCCTCA TCGCCGGCAC GTTGAACGGC TCCGGCAGCT TCCTCATGCG CGCCGAAGGC
ATCGGCGAGG AAACCATGCT CGCCCGCATC GTCGCCCTCG TCGCGGAGGC AGGCCGCTCG
CGCGCGCCCA TTCAAGGATT GGCCGACAAG GTCGCCGCCA TCTTCGTCCC CGCCGTCATC
GCCGTCGCCA TCCTCGCCTT CGCCGCATGG AGCCTCTTCG GCCCCGCGCC CGCCCTCGCT
CACGCGCTGG TCGCCGCCGT CTCGGTCCTC ATCATCGCCT GTCCCTGCGC GCTCGGCCTC
GCCACGCCCA TGTCCATCAT GGTGGCGACG GGGCGGGGCG CCTCGCTCGG CGTGCTGATC
CGCAATGCCG CCGCGCTGGA GCGCCTGGAA AAGGTCGACA CGCTGGTCAT CGACAAGACA
GGCACCATCA CCGAAGGGAA ACCCGTGCTC AAGGCGCTGG AGCCCGCGCC CGGCTTCACC
CGCGCGGAGC TTCTCCACCT CGCCGCCAGT CTCGAGCGCG GCAGCGAACA TCCCCTCGCC
GCCGCCATCG TCTCAGCCGC TGAAGCCGAA GGCCTGAAAC TGACGGACAC GGAAGATTTC
GACGCCCCCT CCGGCAAGGG CGTCGTGGGC ACTGTCGAGG GCCGCCGCGT CGCGCTCGGC
AATCCCGTGC TGATGCGCGA GCTGAACCTG GACACATCCC CGCTCGCCCC CCGCGCCGAC
GCGCTGCGCG ACACCGGCGC CACCGTGGTC TTCCTCGCGG TCGATGGCGC GCTGGCGGGC
CTCGCCGCCG TCGCCGACCC GATAAAGCCC ACCAGCGCCC AGGCCCTCGC GGGCCTCCGC
GCGCTCGGTA TCCGCATCGT CATGCTGACA GGCGACGGCC GCCGCACCGC CGAAGCCGTG
GCGCGCGAAA TCGGCATCGC CGAAGTCGAA GCCGAAATCC TGCCCGAGCA GAAAAGCGAA
ACCGTGAAGC GCCTTCAGGC CGAGGGCCGC ATCGTCGCCA TGGCCGGCGA CGGCATCAAC
GACGCCCCCG CGCTGGCGGC GGCCGATGTC GGCATCGCGA TGGGCACGGG AACCGACATC
GCCATGGAGT CCGCCGGCGT CACGCTGGTG AAGGGCGACC TGACCGGCAT CCTCCGCGCC
CGCGAGCTCA GCCAGGCCAC CATGCGCAAC ATCCGCCAAA ACCTCTTCTT CGCCTTCGCC
TACAACGCCG CCGGCGTGCC CATAGCGGCC GGACTTCTCT ATCCCGTGTT CGGACTATTA
CTGAGCCCCG TCTTCGCGGC AGCGGCCATG TCGCTGTCGT CCGTGTCGGT GATCGGGAAT
GCGTTGCGGT TGAGAAGGGT GAGGCTCTAA
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| Protein sequence | MNTENAPASC CHTHGHAHAH TPKPAAPGSK YTCPMHPEIV ADGPGSCPIC GMALEPMTVS
RDKPENEELK DMTRRFWVAA ILAAPLFAME MGSHLLGLHI PLSPAASGWL QLALATPVVL
WAGWPFFVRG LASLRTMNLN MFTLIAMGTG AAYVYSLAAI LAPGIFPPAF RDAHGAVPLY
FEAAAIITVL VLLGQVLELR ARERTGDALR ALLDLAPRTA RRVVNGADEE VPLEEIAKGD
TLRVRPGERV PVDGELIEGR SAVDESMITG EPLPVEKEPG ARLIAGTLNG SGSFLMRAEG
IGEETMLARI VALVAEAGRS RAPIQGLADK VAAIFVPAVI AVAILAFAAW SLFGPAPALA
HALVAAVSVL IIACPCALGL ATPMSIMVAT GRGASLGVLI RNAAALERLE KVDTLVIDKT
GTITEGKPVL KALEPAPGFT RAELLHLAAS LERGSEHPLA AAIVSAAEAE GLKLTDTEDF
DAPSGKGVVG TVEGRRVALG NPVLMRELNL DTSPLAPRAD ALRDTGATVV FLAVDGALAG
LAAVADPIKP TSAQALAGLR ALGIRIVMLT GDGRRTAEAV AREIGIAEVE AEILPEQKSE
TVKRLQAEGR IVAMAGDGIN DAPALAAADV GIAMGTGTDI AMESAGVTLV KGDLTGILRA
RELSQATMRN IRQNLFFAFA YNAAGVPIAA GLLYPVFGLL LSPVFAAAAM SLSSVSVIGN
ALRLRRVRL
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