Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0377 |
Symbol | |
ID | 5456955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 402853 |
End bp | 403533 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640875942 |
Product | putative hydroxylase |
Protein accession | YP_001411657 |
Protein GI | 154250833 |
COG category | [S] Function unknown |
COG ID | [COG3128] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.925919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCTGG AAATCCCCGA TGTGCTGACA TCGGCGCAAC TGCGCCAGTG CCGCGAGGCG CTGGAAAAGG CGGCATGGCA GGATGGGCGC CAGACGGCGG GCCACATGGC CGCGCAGGCG AAAAACAACC AGCAGCTCGC GCAGGACGAT CCCCTCTCGG TCGAACTTGG CGAATTCCTT CTCGACCGCC TCGGCAAGAC CGATCGTTTC ATCGCCGCCG CCTTGCCGTT GAAGGTTCTG CCGCCGCGTT TCAACCGCTA TAGCGGCGGC GGTAATTACG GCAATCACGT CGATGCGGCA ATTTTCAGCG TCCCCGGCAC GCCGCACCGG ATCAGGTCCG ATATTTCCGC CACGCTCTTT TTCAGTGAGC CTGATGAATA TGAAGGCGGC GAGCTGATCG TCGAGGACAC TTATGGCAGC CACGCGATCA AGCTGCCTGC GGGCCATATG GTCCTCTATC CCGGCACGAG CCTCCACCGT GTTGCGCCGG TCACGAAGGG CGTGCGTCTC GCTTCCTTCT TCTGGGTGCA AAGCCTCGTG CGTGAAGACA GCCAGCGCGC CATGCTCTGG GAGCTCGATG GCGCGATCCA GCGCGTCACG CTCGACACAC CGGAAAGCCC CGCCCTGCCG CAGCTCATGG CGCTCTACCA CAATCTCCTG CGGCGCTGGT CGAACACATG A
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Protein sequence | MMLEIPDVLT SAQLRQCREA LEKAAWQDGR QTAGHMAAQA KNNQQLAQDD PLSVELGEFL LDRLGKTDRF IAAALPLKVL PPRFNRYSGG GNYGNHVDAA IFSVPGTPHR IRSDISATLF FSEPDEYEGG ELIVEDTYGS HAIKLPAGHM VLYPGTSLHR VAPVTKGVRL ASFFWVQSLV REDSQRAMLW ELDGAIQRVT LDTPESPALP QLMALYHNLL RRWSNT
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