| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0376 |
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| Symbol | |
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| ID | 5455248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 400410 |
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| End bp | 402719 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640875941 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001411656 |
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| Protein GI | 154250832 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGAA CCAAGCTGCT CAAATCATCG GCCTCGCACC TGGCCCTTAT GGCCGGGTTG
GCCGTGTCCA TTACGTCGTT CGCGGCCGTC GCCCAGGAAC CGAAGCCCGC CGTTCCGCAA
AGCGAAGCGG AAGCGGATGG CGCCACGGTA ACGGCCCCGA TCAATGTCCA GGGCAACACC
GAGGGGGATT ACAAGGTCGA CGACCTGTCC TCCGCCAAGC AGACGGCACC GATCCTCGAC
ACCCCGCAAA CGGTCACGGT CGTTCCGCAG GAAGTCATCC GCGAACAGGC CGCCCGCAAC
CTCACGGAAG TCCTGAAAAG CACCCCTGGC ATCAGCTTCA ACGGTGGTGA AAACGGCTTC
GGCACATCCG CCAACAATTT CTCGCTGCGC GGTTTCGATA CCAGCGGCAG CGTCTTCATC
GATGGCGCGC GCGATAGCGG CAGCTACACG CGCGATGTCT TCAACGTCGA GCAGGTCGAG
GTCTTCAAGG GCCCGGCTGC GGATAATGGC CGCGGCGGCG CGGGCGGCTA TGTGAACATC
GTCACCAAGT CGCCGCAGCT CGACGACTTC ATTGCCGGCA CCGTCAGCTA CGGCTTCGAC
GAATATGACA GCGAAGATCG CAAGCGAGCG ACGGTCGACG TCAACCAGCG CATCGGCCAG
AATTCCGCCA TCCGCATCAA TGCATTGATG GAAGACAGCG GCATTCCGGG CCGCGAAATC
GCCGAACAGA AAGCATGGGG CATTGCGCCC TCGCTCGCTT TCGGCCTCGG CACGGAATTC
CGCGCGATCT TTTCCTATGA GCATGTCGAG CGCAACGACC TCCCGGAATG GGGCGTTCCC
GGCGCCGCCT ATTCCGACAT GAACGCCAAT AATCCGGATG GACAGGCCGC CTTCGATCCC
GCGCTCGCGG GCATGTCGCG CGACGCCTTC TTCGGTCTCT CCTCCGACTT CGACGATGTC
GACAGCGATG CCGTGATCGC GCGTTTTGAA TATGATCTCG CGCCGACGGC GACACTCAGC
AACCAGACGC GCTGGTCGGT CACGGATCGC ACCGCGCGCT ACACGCTTCC CACCGGCAAT
GCCGGCGGCG GCGTCATCAA TACGCAGACG CAGTTCTACG ATCGCGAAAA CACGAGCCTG
AGCAATCTCA CCGACCTCTC GCTCCGTTTC ACCACAGGCA TGTTGCGGCA TCATGTGTCG
GCCGGTATCG AGCTGACGAA GGAAGAATCC GAAGCCACCC GCTTCGGCGC CGTCAACAGC
ACCACCAGTG CCTTCAACCC GGATCCGAAC CGCGCGCCGG GTGCGCCTTT CGTGCCCGCC
TCCACGGCGG ATGTCGAAGT GAAGACCATC GCCGCCTATG CGTATGACAC GATGGAAATC
GACCCGAAGT GGCAAGTCAC CGGCGGCGTG CGCGCCGAGC GTTACGAGGT CGAAATCGTG
TCGTCGGATG CATCGATTGC AGGCGGCAAC ACCTATGACG ACAGCGAAAC GCTTCTCGGC
GGCAAGATCG GCCTGGTCCA CAAGCCCGTC TCCAATGGCA GCGTCTATGT CTCCTTCGGC
ATGTCGGAAC AGCCCTACGG CTCGTTCCTG TCGAACCCGG ATATTTCGCG CACCGGCGCA
AACGCCTTCC CGGGCTTCGT GCCGGGTGCC AAGCCCATCA CGGCCTATAA TTACGAAGTC
GGCACCAAGT GGGATCTCTT CGGCGATCGT CTCCTCGCCA CCGCCGCGCT CTTCCGCACG
GAGAAGAAGG ATGTGGCCTT CTCCTCGGGC GGCGCGCTTC TCGGCTATGG CCAGCAGATC
GTCCAGGGCC TTGAACTCGG CGCAACGGGC AAGCTCACCG AGGAATGGAA CGTCTTTGGC
GGTCTCCTCC TCATGGATAG CGAGCGTAAG CACGATCCGG CCTTCGACGC GGTTCTCCGT
GCGGCGAATC CCGGCGACTA TGGCACCGCC ACGACCACCA ATGGCGATGA GCTGGCTTTC
ACGCCGAACG TCTCCGCCAG CCTCTGGACG ACCTACCGTC TGCCGGTCGG CCTCACTTTC
GGCGGCGGCA TGCGCTATGT CGGCTCGTCC TATCTCGGCC GCCCGGACGA TGCGCTCCGC
GTCATCGCCA ACAGCCGCTA CGGCGAAGTG CCGAGCTACA CGGTCTTCGA CGCGATGGTG
TCCTATGAAG TGACGGAGAG CATCGACCTC CGCCTCAACG TGGAGAACCT GACGGACCGG
ACCTACATCT CCTCCTCCAA CTGGAATGGC CGCCGCGTCA TGCTCGGCAA TCCCCGTACC
TTCATCGTCA GCACCAGCTT CAAGTTCTGA
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| Protein sequence | MTRTKLLKSS ASHLALMAGL AVSITSFAAV AQEPKPAVPQ SEAEADGATV TAPINVQGNT
EGDYKVDDLS SAKQTAPILD TPQTVTVVPQ EVIREQAARN LTEVLKSTPG ISFNGGENGF
GTSANNFSLR GFDTSGSVFI DGARDSGSYT RDVFNVEQVE VFKGPAADNG RGGAGGYVNI
VTKSPQLDDF IAGTVSYGFD EYDSEDRKRA TVDVNQRIGQ NSAIRINALM EDSGIPGREI
AEQKAWGIAP SLAFGLGTEF RAIFSYEHVE RNDLPEWGVP GAAYSDMNAN NPDGQAAFDP
ALAGMSRDAF FGLSSDFDDV DSDAVIARFE YDLAPTATLS NQTRWSVTDR TARYTLPTGN
AGGGVINTQT QFYDRENTSL SNLTDLSLRF TTGMLRHHVS AGIELTKEES EATRFGAVNS
TTSAFNPDPN RAPGAPFVPA STADVEVKTI AAYAYDTMEI DPKWQVTGGV RAERYEVEIV
SSDASIAGGN TYDDSETLLG GKIGLVHKPV SNGSVYVSFG MSEQPYGSFL SNPDISRTGA
NAFPGFVPGA KPITAYNYEV GTKWDLFGDR LLATAALFRT EKKDVAFSSG GALLGYGQQI
VQGLELGATG KLTEEWNVFG GLLLMDSERK HDPAFDAVLR AANPGDYGTA TTTNGDELAF
TPNVSASLWT TYRLPVGLTF GGGMRYVGSS YLGRPDDALR VIANSRYGEV PSYTVFDAMV
SYEVTESIDL RLNVENLTDR TYISSSNWNG RRVMLGNPRT FIVSTSFKF
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