| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0375 |
|---|
| Symbol | |
|---|
| ID | 5456121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 399146 |
|---|
| End bp | 400075 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640875940 |
|---|
| Product | TonB-system energizer ExbB type-1 |
|---|
| Protein accession | YP_001411655 |
|---|
| Protein GI | 154250831 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | [TIGR02797] tonB-system energizer ExbB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATG GGCCTGCGGG CAAGCTGCGC GCGACATTTT TCCACTTCTC TCTCGCCGCA
CTTCTGAGCG CTTTTGTGCT GGCCTCCCCG CTGCATGCGC AGGAGGCGCC TGCGGGCGAC
GGATTTGGCC AGGAAGAGAG CCTGACGCCG CTGGACGGCG CGGCGACGGA AGACGCCATC
GGCATTTCCG AAGACCTGAC AGCCGAGGAG CTGGCGGCGA TGGGCGAGAC GGAGGCGCTG
CCCGACGATC TTTCGCCCTG GGGCATGTTC CTCGCCGCCG ACATTGTCGT CAAAGCAGTG
ATGATCGGGC TCGTCTTCGC TTCGATCGTC ACCTGGACGA TCTGGCTGGC GAAGAACACG
GAGATTGCAC GGGCGCGCAG CCGGGCGAAA AGCGGCTTTG CCGCGCTTGC CGCTTCGAAG
ACGCTGGACG AGGCGGGAGA AAAACTTCGC TCGGCGAAAG GCCCGGTGCA GCAACTGGCG
CAGGCGGCGA TACACGAAAT GCAGCTTTCG GGCACCGCGC CCGACAAGGA AGGCGTGAAG
GAACGCATTG CATGGCGCTT CCAGCGCATC GAGGCGAACA CGGCGCGTGA AATCGGCATC
GGCACGGGCG TGCTTGCGAC CATCGGCGCG ACGGCGCCTT TCGTCGGGCT GTTCGGTACC
GTCTGGGGCA TCATGAACAG CTTCATCGGC ATCGCGCATA CTCAGACGAC GAACCTTGCG
GTGGTGGCGC CCGGCATCGC GGAAGCCCTG CTCGCAACGG GGCTCGGACT TGTTGCCGCC
ATTCCCGCCG TTGTGATCTA CAACTCGTTC TCGCGCGCCA TTGCCGGCTA CCGCGCCATC
GTTGCCGACA GTTCGGCGGA GCTGCTGCGC CTCGTCAGCC GCGACCTCGA CCACGGCCGC
GAACAACGGC TCGCCAAGGC GGCGGACTGA
|
|---|
| Protein sequence | MTNGPAGKLR ATFFHFSLAA LLSAFVLASP LHAQEAPAGD GFGQEESLTP LDGAATEDAI
GISEDLTAEE LAAMGETEAL PDDLSPWGMF LAADIVVKAV MIGLVFASIV TWTIWLAKNT
EIARARSRAK SGFAALAASK TLDEAGEKLR SAKGPVQQLA QAAIHEMQLS GTAPDKEGVK
ERIAWRFQRI EANTAREIGI GTGVLATIGA TAPFVGLFGT VWGIMNSFIG IAHTQTTNLA
VVAPGIAEAL LATGLGLVAA IPAVVIYNSF SRAIAGYRAI VADSSAELLR LVSRDLDHGR
EQRLAKAAD
|
|---|
| |