Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0365 |
Symbol | |
ID | 5453856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 389831 |
End bp | 390646 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640875930 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_001411645 |
Protein GI | 154250821 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.940148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGATC GCATCAGGAC GACAATCACG GACGGCGTCG CCGATGTGCG CCTCGTGCGC AGCGACAAGA TGAACGCGCT GGACGACGCG ATGTTCATGG CGCTGCTCGA AACCGGCGAA AAGCTGAAGT CCGACAGCGC CGTGCGCGCC GTCGTCATCT CCGGCGAAGG CCGCGCCTTC TGCGCCGGCC TCGACATGAG CAATTTCGGC CGCATGGCCA GCAGCGAAAG TGCACCCGCG AAGGAATCGA GCGTCACCGG CCGCCTCGCG CCGCGCACGC ACGGCATAGC GAACCGGGCG CAATATGCGG CGCTCGTCTG GCGCGACATT CCGGTTCCGG TCATCGCGGC CGTTCATGGC GTTGCCTTTG GCGGCGGCTT TCAGGTCGCG CTCGGTGCCG ACATGCGCTT CGTCGCGCCC GGCACGCGCT TCTCGGTCAT GGAAATCAAA TGGGGCCTCG TGCCCGACAT GGCCGGCATG TTCCTGATGA AGGGCCTCGC GCGCGAGGAC ATCATCCGCG ACCTCACCTA TACGGGCCGC ATCTTCGAGG CCGACGATGC GCTGGCTTAT GGCTTTGCGA CGCGGCTCTG CAACGACCCT TATGCCGAGG CACTGAGCGT CGCGCGCGAA ATTGCCGACA AGAGCCCGTC CGCCATCCGC GCCGCCAAGC GCATCCTCAA CGACGCGCCG GACAATGACG CCGCCGCGAT CCTGCTGGCC GAATCCGTCG AGCAGGACAA GTTGATGGGC GGCGCGCATC AGAAAGAAGC CATCATGGCC AATCTCGAAA AGCGCCGCCC GAATTTCGGA GGCTGA
|
Protein sequence | MEDRIRTTIT DGVADVRLVR SDKMNALDDA MFMALLETGE KLKSDSAVRA VVISGEGRAF CAGLDMSNFG RMASSESAPA KESSVTGRLA PRTHGIANRA QYAALVWRDI PVPVIAAVHG VAFGGGFQVA LGADMRFVAP GTRFSVMEIK WGLVPDMAGM FLMKGLARED IIRDLTYTGR IFEADDALAY GFATRLCNDP YAEALSVARE IADKSPSAIR AAKRILNDAP DNDAAAILLA ESVEQDKLMG GAHQKEAIMA NLEKRRPNFG G
|
| |