Gene Plav_0365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0365 
Symbol 
ID5453856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp389831 
End bp390646 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content65% 
IMG OID640875930 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001411645 
Protein GI154250821 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.940148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATC GCATCAGGAC GACAATCACG GACGGCGTCG CCGATGTGCG CCTCGTGCGC 
AGCGACAAGA TGAACGCGCT GGACGACGCG ATGTTCATGG CGCTGCTCGA AACCGGCGAA
AAGCTGAAGT CCGACAGCGC CGTGCGCGCC GTCGTCATCT CCGGCGAAGG CCGCGCCTTC
TGCGCCGGCC TCGACATGAG CAATTTCGGC CGCATGGCCA GCAGCGAAAG TGCACCCGCG
AAGGAATCGA GCGTCACCGG CCGCCTCGCG CCGCGCACGC ACGGCATAGC GAACCGGGCG
CAATATGCGG CGCTCGTCTG GCGCGACATT CCGGTTCCGG TCATCGCGGC CGTTCATGGC
GTTGCCTTTG GCGGCGGCTT TCAGGTCGCG CTCGGTGCCG ACATGCGCTT CGTCGCGCCC
GGCACGCGCT TCTCGGTCAT GGAAATCAAA TGGGGCCTCG TGCCCGACAT GGCCGGCATG
TTCCTGATGA AGGGCCTCGC GCGCGAGGAC ATCATCCGCG ACCTCACCTA TACGGGCCGC
ATCTTCGAGG CCGACGATGC GCTGGCTTAT GGCTTTGCGA CGCGGCTCTG CAACGACCCT
TATGCCGAGG CACTGAGCGT CGCGCGCGAA ATTGCCGACA AGAGCCCGTC CGCCATCCGC
GCCGCCAAGC GCATCCTCAA CGACGCGCCG GACAATGACG CCGCCGCGAT CCTGCTGGCC
GAATCCGTCG AGCAGGACAA GTTGATGGGC GGCGCGCATC AGAAAGAAGC CATCATGGCC
AATCTCGAAA AGCGCCGCCC GAATTTCGGA GGCTGA
 
Protein sequence
MEDRIRTTIT DGVADVRLVR SDKMNALDDA MFMALLETGE KLKSDSAVRA VVISGEGRAF 
CAGLDMSNFG RMASSESAPA KESSVTGRLA PRTHGIANRA QYAALVWRDI PVPVIAAVHG
VAFGGGFQVA LGADMRFVAP GTRFSVMEIK WGLVPDMAGM FLMKGLARED IIRDLTYTGR
IFEADDALAY GFATRLCNDP YAEALSVARE IADKSPSAIR AAKRILNDAP DNDAAAILLA
ESVEQDKLMG GAHQKEAIMA NLEKRRPNFG G