| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0354 |
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| Symbol | |
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| ID | 5456556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 375494 |
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| End bp | 377050 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640875919 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001411634 |
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| Protein GI | 154250810 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.564378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCGCT TGCCCAAAGC GTTCGCGATC GCTGCGCTTG CGGCGGTCGT GGCGGCGATC
GGCGTATGGA GTATCGCCGG CGCCCAATCT CAGACCTACA AGTTCGAGGC CGTGTCGGAG
GAAATACCGG TCGGCGAGCG CGTCCGGATC GAGGTCCGGC TGCATGACCC GAGCGGCAAG
CCCGTGCCGG CCGGGGATAT CGACATCGTC TCGACGCGGC TCGACATGGG CCCCGACGGC
ATGGCGATGA TGGATACGCC GCTCAAGCCG GTTCCGGCCG ACGCGCCGGA TGTCATCGTT
TTCGAAACGA AGATCGTGAT GGCCGGTCGA TGGGCGCTCA CGATCGAGGC GGAAATCGAC
GGCGTGCCGG CGCCCGTCAA GGGCATCGTT ATCTACACAG CCGTCGAGAA AAAGGCCGAC
GCAACCCCTG CCACGCCAGC GGCAGGGGAG CGCAAGATAC GTTATTACCG CAACCCGATG
GGCCTGCCCG ACATATCGCC GGTGCCGAAA AAGGACTCGA TGGGGATGGA TTACATTCCC
GTCTATGAGG ACGATTTCGC GGGCCCCGCG GGCACCGTTC GCGTCGGCCT CGAAAAGATG
CAGCGCGCCG GCGTCAGGAC GGCGCCGGTC GAACGCCGCG ACCTTGTCCG CGCGGTCCGC
GGCGCCGGCA CCGTGATGGC GGACGAGGCC CGCGTCGCGC TGGTAACGGC TCGCTTCGAC
GGCTTCGTCG AACGTCTCGA TGTCCGCACC ACCGGCGGCA CGGTGACGGC CGGCGAGCCG
CTGCTGACAG CCTGGATCGA AAGCGACGAG CTGCTGCGCA AACAGGCCGA CTACCTCTCG
GCGCTGTCGC GTGGCGGCAG CGATGTCGAA CGTGCCGCGA AAAATCTTCG CCTCTTCGGC
ATTTCCAGCG CCGTCATCGC GGAAATGGCA CGCACGCGCG CGCCGGCACG GGTGGTGACT
TTCGACGCGC CGCTCGGCGG CACCGTCATC GAAAAGCCCT CGCTCGACGG CATGCGCTTT
TCGGCCGGCG ATACGCTCTT CAAGATCGCC GATCTCTCGG CGCTCTGGGT GATGGTTGAA
ATCGCCGAAC AGGATCTTGC ATTTGTCAGG CCCGGCCAGA CCGCGCGATT GTCGATGCCG
GCAATGCCCG GAGATACGCG CGAAGCGATT GTCGATTTCG TCTATCCCGA TATCGGCATG
GCGACCCGCT CGGGCCGGGT CCGGCTGGTT GTGCCGAATG CGGATGGGCG CCTCAAGCTC
GGACATTTCG TGAGCGTCGA GATCGACACA CTGGTCGGCG GCGGACCGGC TCTTGCGGTA
CCGGTTGCCT CGGTCATCGA TGATGGCACC CGTCAGGTTG TGTTCGTCGC GCGCGGCAAC
GGGCTCTTCG AACCGCGTGA TGTTCGTCTC GGTGCCCGCG CCGGCGCCGA TGTCGAAATC
AGGGAAGGTC TAGCCGCCGG TGAGGAGATC GTCACTTCCG GCATCTTCCT GATCGATGCC
GAGAGCAATC TCCAGACCGC GCTTTCGGCC TTCACCGCCG AACCGGTGGC GCCATGA
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| Protein sequence | MVRLPKAFAI AALAAVVAAI GVWSIAGAQS QTYKFEAVSE EIPVGERVRI EVRLHDPSGK
PVPAGDIDIV STRLDMGPDG MAMMDTPLKP VPADAPDVIV FETKIVMAGR WALTIEAEID
GVPAPVKGIV IYTAVEKKAD ATPATPAAGE RKIRYYRNPM GLPDISPVPK KDSMGMDYIP
VYEDDFAGPA GTVRVGLEKM QRAGVRTAPV ERRDLVRAVR GAGTVMADEA RVALVTARFD
GFVERLDVRT TGGTVTAGEP LLTAWIESDE LLRKQADYLS ALSRGGSDVE RAAKNLRLFG
ISSAVIAEMA RTRAPARVVT FDAPLGGTVI EKPSLDGMRF SAGDTLFKIA DLSALWVMVE
IAEQDLAFVR PGQTARLSMP AMPGDTREAI VDFVYPDIGM ATRSGRVRLV VPNADGRLKL
GHFVSVEIDT LVGGGPALAV PVASVIDDGT RQVVFVARGN GLFEPRDVRL GARAGADVEI
REGLAAGEEI VTSGIFLIDA ESNLQTALSA FTAEPVAP
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