| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0350 |
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| Symbol | |
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| ID | 5454431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 370772 |
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| End bp | 372868 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640875915 |
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| Product | copper-translocating P-type ATPase |
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| Protein accession | YP_001411630 |
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| Protein GI | 154250806 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.747066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAG ATGGCAATGC GCCGCCCGAT CACGACCACA GGGAACCCGC CGGCGCCCGA
AGACACCGTC ACGCTCCAGG TGGGGTTGTG ATAGTGGCGG CGGCTGGATC TTCTGATGCG
GAACACGCTG GCCATGATCA TACGGCCATG GTCGCGGATT TCCGGCGCCG GTTCTGGGTT
GCGTTGACCC TGACGCCGCC CGTCCTGTTG CTCTCGCCGA TGATCCAGCG CTGGTTCGGC
CTTGCCGAAA CGCTCGCGTT TCCCGGCGAT GGGCTCGTGC TCTTCGGGCT TTCCACTATC
GTCTATCTCC ATGGCGGCTG GCCCTTCCTC ATCGGTTTCG TGTCCGAGCT GCGCAAGAGG
CAGCCCGGAA TGATGACGTT GATCGCGTTG GCGATCTCGG CGGCGTACTT CTTCTCCGTC
GCGACGACGT TCGGCTTTCC CGGCGAACCC TTCTATTGGG AGCTGGTAAC GCTGGTCGCC
ATCATGCTCC TCGGCCATTG GGTCGAAATG CGCTCCGTCA TGGGCGCGTC GCGTGCTCTC
GAAGAACTCG TGCGGCTGTT GCCGGATAGC GCGACGAAGG TCGACGCCGA TGGCGGGATG
CGCGAGGTGC CGATCTCTGC TCTGCGGCCG GGCGACAGGG TCCTTGTTCG GCCGGGTGCC
AGGGTCCCTG TGGATGGCGC GATCGTTGAG GGATCTTCGG GTTTCAATGA AGCGATGCTG
ACGGGCGAAT CCCGCCCGGT CGCCAAATCG ACGGGTGACC GTGCGATCGG CGGCGCGATC
AACGGCGCGA ACGCGGTCAC GATCGAGGTA ACGGCCACTG GCGATAAAAC CTACCTCGCC
CAGGTCATAG ATCTTGTCAG GAAGGCCCAG GCGACACGTT CGCACACCCA GGATATCGCG
AACCGCGCGG CATCCTGGCT GACATATATC GCCTTGATTG TCGGTTTCGG CACGCTTGTT
GTCTGGCTCG CGCTCGGACA GTCGCCCGAA TTTGCTCTCG AGCGCATGGT GACGGTGATG
GTCGTCGCTT GCCCGCATGC CCTCGGCCTG GCCGTTCCGC TGGTGGTCGC CGTCAGCACG
TCACTCGGTG CCAGCAACGG CCTTCTCATC CGCGACCGGG CCGCGTTTGA GCGCGCGCGC
AATCTGAACG TCGTGGTTTT CGACAAGACG GGCACTCTGA CCGAAGGTCG GTTCGGCGTG
AGTGACATCG TCATGCTGGA CGATGGCGAC GAAGCGAAGG AGCTAGCCTT CGCGGCAGCC
GCCGAAAGCC AGTCCGAGCA TCCGATAGCC CGTGGGATCA CGGCGGAGGC CGAACGGCGG
AAGCTGATTG TCCCCCGGGC GAGCGACGTC CGCAATATCA CCGGTGAAGG CATCGCGGCA
AATGTCGAGG GAGAGGATGT GCGCATTGTC AGCCCCGGGC ATCTTGCGCG GCAGGGCAAA
GCCGCGGGCG GCGAACGGCT GAAGCAACTC GAGGCGCAAG GCAAGACCGT CGTGGTGCTG
ACGCGCGGGG GACAACCGCG CGCACTGATT GCGTTGGCCG ATATCGTCAG GCCGGAGTCG
AGGGAAGCCA TCGCCGAACT GGCGAGTCTC GGCCTCAGGT CCGTCATGCT GACCGGGGAT
GCCAGGGGCG TGGCACAATC GGTATCGGAC GAACTTGGCA TCGCCGAGTA TTTTGCGGAA
GTGCTGCCCG ACCGGAAGTC GGACAAGATC AGGGAACTCC AGGACCGCGG GCTTCAGGTC
GCCATGGCCG GCGACGGCGT GAACGATGCC CCAGCGCTGG TGCAGGCCGA CCTCGGCATC
GCCATCGGAG CCGGCACGGA CGTGGCGGTG GAATCGGCCG ACGTCGTGCT GGTCAGGAGC
GATCCGCGCG ACGTGGCCGC GATCCTCGGC CTGTCGCGCG CGACCTATCG CAAAATGGTC
CAGAACCTGA TCTGGGCGAC GGGATACAAC GCCATAGCCA TCCCGATGGC GGCCGGTATC
ACTTTCGGAA CCGGTTTCAT GATGACGCCG GCCGTTGCCG CCGTCTTCAT GTCGGCGAGC
ACCGTCATCG TCGCCATCAA CGCACAATTT CTGCGCTTCT ACAGGCGGCG CGGATGA
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| Protein sequence | MAKDGNAPPD HDHREPAGAR RHRHAPGGVV IVAAAGSSDA EHAGHDHTAM VADFRRRFWV
ALTLTPPVLL LSPMIQRWFG LAETLAFPGD GLVLFGLSTI VYLHGGWPFL IGFVSELRKR
QPGMMTLIAL AISAAYFFSV ATTFGFPGEP FYWELVTLVA IMLLGHWVEM RSVMGASRAL
EELVRLLPDS ATKVDADGGM REVPISALRP GDRVLVRPGA RVPVDGAIVE GSSGFNEAML
TGESRPVAKS TGDRAIGGAI NGANAVTIEV TATGDKTYLA QVIDLVRKAQ ATRSHTQDIA
NRAASWLTYI ALIVGFGTLV VWLALGQSPE FALERMVTVM VVACPHALGL AVPLVVAVST
SLGASNGLLI RDRAAFERAR NLNVVVFDKT GTLTEGRFGV SDIVMLDDGD EAKELAFAAA
AESQSEHPIA RGITAEAERR KLIVPRASDV RNITGEGIAA NVEGEDVRIV SPGHLARQGK
AAGGERLKQL EAQGKTVVVL TRGGQPRALI ALADIVRPES REAIAELASL GLRSVMLTGD
ARGVAQSVSD ELGIAEYFAE VLPDRKSDKI RELQDRGLQV AMAGDGVNDA PALVQADLGI
AIGAGTDVAV ESADVVLVRS DPRDVAAILG LSRATYRKMV QNLIWATGYN AIAIPMAAGI
TFGTGFMMTP AVAAVFMSAS TVIVAINAQF LRFYRRRG
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