| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0346 |
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| Symbol | |
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| ID | 5455555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 367212 |
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| End bp | 369011 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640875911 |
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| Product | CopA family copper resistance protein |
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| Protein accession | YP_001411626 |
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| Protein GI | 154250802 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.513863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.476726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCCGA AAATTTTCTC CGGCCCTGCG CCTCTCATGC GTGGACGGAC AATTGCAATC
CTCGGCGCCG CGCTGCTCTG GGCGCTGCCC GACGCCGCGC CGGCTGTCGC CGGTGAATAT
CGCCTGACCG TCGAGACGGC GGAGCTCGAG GTCGGCGGCC GGATGGTCGA GAAGATGGTG
ATCAATGGCG GCGTTCCGGG GCCGACATTG CGGCTTCGCG AGGGCGAGGA CGCGACCATC
ACGGTCGCCA ACAAAACCGA TGAAGCGACA TCGGTACACT GGCACGGCAT TCTTCTGCCC
GGCATCATGG ACGGGTCCCC GGGTTTCAAC GGCTTCATGG GGATCGCGCC GGGCGCTTCC
TATACCTACA CCTTCCCGAT CCGCCAGAGC GGCACCTACT GGTATCACAG CCATTCCGGC
ACGCAGGATC AGACGGTGCT CGGCGCGATC GTCATCGAAC CGGCAAAGCC GTCGCCCTTC
AGCGCGGACC GCGACTATGT CGTGCTTCTC GGCGATGCCA CGCCCGAGGA TTCCGATCGG
GTCCTGCGCA ATCTCAAGGC CGATCCGGGC TACTACAATT ACAACAAGCG CACGCTGCTC
GACTTCTTCG CGGATGTCGG CGAGGAGGGC GTCGGCGCCG CCGTCCAGGA TCGCCTCGAC
TGGGGCGCCA TGCGGATGGA TCCGACCGAT CTCGCGGATG TGACCGGTTA CTCTTTCCTC
GTCAACGGCA AGACGCCCGA ACGGAACGAG ACTTTTCTCT TTCGCAAAGG CGAGCGTATC
CGCCTGCGCC TGATCAACGG CGCGGCGATG ACGCTTTTCG ATGTGCGGAT TCCGGGCTTG
AAAATGACCG TCGTCGCCGC GGACGGCAAT GATGTGAACC CTGTGCCCGT CGACGAACTC
CGGATGGGTG TCGCCGAGCG CTACGACGTC ATCGTCGAGC CGAAGGAAGA CATGCCTTAC
ACGCTCTTTG CCGAGTCGAT CGACCGCGCG GGCTATGCGC GCGCGACGCT GGCGACGTCG
GAAGGCAAGG TGGGGCCGAT CCCCGAGCGG CGTCCGCGCG CGCTGCTCAG CATGGCCGAT
ATGGGTATGG CACATGAGGG GCACGACATG GGAGCGATGG ATTCCAGCGC CGCCGACTCC
GGAACCACGG ACGCAGGCGC GGTGGATCAC AGCACCATGG ATCACAGCAC CATGGGACAT
GCCACCGCAG GCAACGCCGC GGAAGCGGAC GCGCCCGAAA CCCGACCGGT CGGCTGGGCT
TCGGGCTTTC CGCCGGACGC GAAAGTGCTG GCCTATAGCG ACCTGCGCGC GCTTCGCCCC
AACGCCGACA ACAGCGAGCC GACCCGCACC ATCGAAATGC GCCTCACCGG CAACATGGAA
CGTTATGTCT GGACGCTCGA CGATGCGCGC TTCGTCGAGG CCTGGCCGGT CCGCGTGCGC
TATGGCGAGC GCGTTCGTCT CACCTTCGTC AACGAAACGA TGATGGCGCA TCCGATGCAC
CTGCACGGCA TGTTCTTCGA GCTCGAAACT GGCAGCAAGG ATCGCCGGCC CCTGAAGGAT
ACCGTCATCG TGCCGCCGGG GCAGTCCGTC TCCGTCGTTC TGGCGGCGCG CGAGGTCGGC
GGCTGGCCGC TTCACTGCCA TCTGCTCTAC CACATGGTCT CGGGCATGAT GACGACCTTC
ATCGTCGAAC CGCCCGGGAC GGCCGATAGC GCGATCACGC CGGATGGCGC GGTGGTGCCG
ATTGGCGTCA CGAAAGACGG GCCGGCGCAC GGGGCGCATG CCGGACATGG AGGCACGTGA
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| Protein sequence | MFPKIFSGPA PLMRGRTIAI LGAALLWALP DAAPAVAGEY RLTVETAELE VGGRMVEKMV
INGGVPGPTL RLREGEDATI TVANKTDEAT SVHWHGILLP GIMDGSPGFN GFMGIAPGAS
YTYTFPIRQS GTYWYHSHSG TQDQTVLGAI VIEPAKPSPF SADRDYVVLL GDATPEDSDR
VLRNLKADPG YYNYNKRTLL DFFADVGEEG VGAAVQDRLD WGAMRMDPTD LADVTGYSFL
VNGKTPERNE TFLFRKGERI RLRLINGAAM TLFDVRIPGL KMTVVAADGN DVNPVPVDEL
RMGVAERYDV IVEPKEDMPY TLFAESIDRA GYARATLATS EGKVGPIPER RPRALLSMAD
MGMAHEGHDM GAMDSSAADS GTTDAGAVDH STMDHSTMGH ATAGNAAEAD APETRPVGWA
SGFPPDAKVL AYSDLRALRP NADNSEPTRT IEMRLTGNME RYVWTLDDAR FVEAWPVRVR
YGERVRLTFV NETMMAHPMH LHGMFFELET GSKDRRPLKD TVIVPPGQSV SVVLAAREVG
GWPLHCHLLY HMVSGMMTTF IVEPPGTADS AITPDGAVVP IGVTKDGPAH GAHAGHGGT
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