Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0342 |
Symbol | |
ID | 5454783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 362448 |
End bp | 364676 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640875907 |
Product | hypothetical protein |
Protein accession | YP_001411622 |
Protein GI | 154250798 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.460096 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGCC TCGATTTCAC GAAGCCGGAG AATGTCGTTC TCGGCGCCAT CGTTGCGGCG TTCTGGCTTT TCGCGCTGAT CTTCCTCGCG CCCTTCGCGA TCCTGATTGC GGTCGCAGGC CTTGGCTACT GGCTCGTGAC CGCGATCTAT AACCGGCCGG CGGCCCGGAT GGCGCGGGGC CGCGCGGACG CCGAGCGGCT TTACGAGGCG GCGCTCGCGC TCCAGAAGGC GAAAGGTTTC CCGGAGACGG AAGCCTTCCG CTCGCGGGTC TGGGGTCGGC TCTACGAGCT TCTCGACGAG CGCTATCCCT CGCTTGGTAT CGCCGCGGAA ATGGTGACGC TCATCGAGGT GCTGTATCGG GCGGAGGGCT TCACCGGCGA GATTCCGAAG CCGCCTGAGG AGGTGGGAGA GATCGAGCTT GCGCGTTACC GCGACCGGAT CGGGTATTTG ACCGCGAAGT TCGGCCGGCC GGAGGTGATC GAGCGGGCCT ATGAGACGCT GCTGCTTGCG CTTTGGGATT TCTGTCGGCT CCTGCCACCG AACGCGCTCC AGACCCATGA CGAGCTTCTG GAAGCCGCCG AAGCCGGCCG CATGACCGGC CCCTTCGCGA TCCGGCTGAT GGAGGCACTA CCCAAAACAG GCGAGGCGGT CGAAGCGCTC GCGTTCTCGT TCTACCGGCG GGACGCAATC GAGGCCGGGC TCTTTGCCGG GCTCCGGGAG CGGCTGTCGC GGAACCAGCA TGGTGCTTCG GGCCTGCCTT ATGAGCCCCG CTTCTACGAT TCCCCGAAGC TCGTGAACCC CTCGGACCAT GAAGGCAGCC CTCACGAGAT CGTCCATGCC TATTTGAAGG AGACGCCTTT CGAGGGGCTC TTCTCGGCGG GCATCCCCCT GGAGATCCCG GACAGCGCCC GGTTCGAGCA TCACTGGATC GTGGCGGGGT CGGGCCATGG CAAGAGCCAG ACGCTCCAAT ACCTCATCGC CCATGACCTC GACCGGGTCG CGCGAGGGGA GGGGAGCGTC GTCGTCATCG ATTCCCAAGG CGACCTCATC CGCAACATTG CGGGTCTGAA GATATTCGCG CCCGGCGAGC CGCTTGCCGG CAAGTTCTGC CTGATCGATC CGACCGATAT CGAATATCCG CTCGCGCTCA ATCTCTTCGA CGCCGGTATG GAGCGGATCG GCTCCTATCC ACCGCTTGAG CGCGAGCGCC TCGTGAACGG GATTCTCGAA CTCTATGATT TCGTGCTGGG GTCGCTCCTT TCGGCGGAGC TCACGCAGAA GCAGAGTGTT ATCTTCCGCT ATATCACGCG GCTGATGCTC CATATCCCGG ATGCGACCAT TCATACGTTC CGGGAGTTGA TGGAGCCCAA AGGCTACGAG AAGTATCAGG GCCATATCGA AAAGCTCGAC GGCACGGCCC GGGCCTTTTT CGAGACGGAA TTCAACAGCA AGCAGTTCGA GGACACCAAG CGGCAGGTGG TGCGCCGCCT CTGGGGCATT CTCGAGAACC GGACCTTCGA GCGCATGTTC TCGCATCCAA GAAACAGGCT CGATCTCTTC AGCGAGATGA ATGAAGGCAA GGTGATCCTG ATCAATACGG CGAAGGACCT CCTGAAGCAG AACGGCACCG AAATCTTCGG CCGCTTTTTC ATCGCGCTCA TCGCGCAAGC CGCGCAGGAG CGCGCGACGC TCGCCCGGGG CGACCGGCTG CCCACCTTCG TCTATGTCGA CGAATGCGCC GACTATCTCG ACCAGAATGT CTCGGTGATC CTCGAACAGG CGCGGAAGTT CAATGTGGGC ATGGTGCTCG CGCATCAATA TATCGGTCAG TTGTCCCCGA AACTGCAGGA GAGCTTCGCC GCGAATACCA GCATCAAGTT TGCGGGCGGC GTTTCGGAGA AGGATGCCCG CGCCTTGGCT CACATGCTCC GGACAACGCC AGAGTTCATC ACCGCGCAGG GCAAGGGGCA GTTCGCCGTC TCGATCCGCA ATATGACCCA GGGCGCGATC TCGCTCGGCT TTCCCTTCGG CCATCTCGAA GCCCTTCCAC GCATGACTGC GGCAGAGGCC GAAGCCGTCC GCGGCGAGAT GCGGGCGCGC TACGCCGTTC ACTGGGAGGA GGTCGAGCGG GAGAGGGAAG AGAAGGAAAC ATCGAAGAAG GATGCCGAAC CGGTGACACC CGCAATCCGA TCCGCTCCGA TCGACACGGC GCCGTCGAGC GACTGGTAG
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Protein sequence | MSGLDFTKPE NVVLGAIVAA FWLFALIFLA PFAILIAVAG LGYWLVTAIY NRPAARMARG RADAERLYEA ALALQKAKGF PETEAFRSRV WGRLYELLDE RYPSLGIAAE MVTLIEVLYR AEGFTGEIPK PPEEVGEIEL ARYRDRIGYL TAKFGRPEVI ERAYETLLLA LWDFCRLLPP NALQTHDELL EAAEAGRMTG PFAIRLMEAL PKTGEAVEAL AFSFYRRDAI EAGLFAGLRE RLSRNQHGAS GLPYEPRFYD SPKLVNPSDH EGSPHEIVHA YLKETPFEGL FSAGIPLEIP DSARFEHHWI VAGSGHGKSQ TLQYLIAHDL DRVARGEGSV VVIDSQGDLI RNIAGLKIFA PGEPLAGKFC LIDPTDIEYP LALNLFDAGM ERIGSYPPLE RERLVNGILE LYDFVLGSLL SAELTQKQSV IFRYITRLML HIPDATIHTF RELMEPKGYE KYQGHIEKLD GTARAFFETE FNSKQFEDTK RQVVRRLWGI LENRTFERMF SHPRNRLDLF SEMNEGKVIL INTAKDLLKQ NGTEIFGRFF IALIAQAAQE RATLARGDRL PTFVYVDECA DYLDQNVSVI LEQARKFNVG MVLAHQYIGQ LSPKLQESFA ANTSIKFAGG VSEKDARALA HMLRTTPEFI TAQGKGQFAV SIRNMTQGAI SLGFPFGHLE ALPRMTAAEA EAVRGEMRAR YAVHWEEVER EREEKETSKK DAEPVTPAIR SAPIDTAPSS DW
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