| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0333 |
|---|
| Symbol | |
|---|
| ID | 5456076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 356581 |
|---|
| End bp | 357744 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640875898 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001411613 |
|---|
| Protein GI | 154250789 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.616988 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATTG CCGGTGGCAT ATACGCGGAA AGGTGCCGCT TTCCTCGGTG GAATCAACTT
TACGGGTCCG GACTGCGCTC TGCAGTTGCG CTTAGTTCGG TGACAATCAA TGTGGAATTG
CATGCTTATG CTGCAGAGCC TTGGCACAAC GATATTGTCG CAACTTTGGA CTCCTTTGGT
ATCGCGCGAC AGTTAACACA AATTGAAAAG GGCGTGACGT TTGACTATCT CCACCCATTC
GAGCTTGCAG CCTGCACTGA GCCAACTGAG GCCGCGCAGC GACTCGAAGT TGAAGGACAG
TCCGTTCTCA GATTCGGATT AATTGAGGGA GATGCCCGAG TAAGCGGTAA TCGCGTGGTC
TATGATCCAC AGTCACCCAA GCCAGCACCC TTTGCGGCCA ACGGGTCAGA GGCAGAGAAC
CTCGCTCTCA TTTTAACAGA GCGGGAGCTA TTCTCGCTAG CCGGGCTGCA GTGCGATGAA
GATGACCGTT CTAGCTCATT GAGAGAGGCA ATCACCGAGT TATTTGACAC GAAACCACGA
GGTGAATTTC TTCTTCTCCT CAAGGATAGG CTGGGTGGAG CTCGACTTTA TACCAGCGAC
GACAATCCTC TAAGAATACC ACCAGTCGCA GCAGAGAGTT ATTTCAGGAT CGGCTCCGGG
GATGTTTTTG CCGCGGCCTT TGCGCATGCA TGGGCCGAAG AGAAGAGTTC GCCAATGAAC
GCGGCAGAAT ATGCAGCACA GTGCGTAGCG TACTTCGTTG ACGGTCCTCG ACTTCCCCTA
CCTCCGAAAG ATCGACTTCC GAAGGCAACG CCAGGGATGC CGCAGGCAGG TGTCGTACGT
TTGTTGGGGC AGGGCATGCT GGAGTTCGAG ACGCTCCTAC TGCACACGGC CGACTGGATC
GTCGAGCTGG GCGGCAAGGC TACGGTGGAC CTATTTGGAG ACTTCACCGG AGGAACCGAA
GATACAACGT CATTCCTGAT TTTGGTCGGC CCTCGCTGGG ATCAGGATAT GATTGGCAGA
TATTCCGAGA TCACGTCGGG ATTACCAACG GTTGTATACT GGCCCGACGC TCCGGGCGGT
GTTCAGAACA TCCTTCCAAA CGCACATATA ACTACCGACT ACACAACAGC ACTTTACCTT
ACGCTTCGGG GTTTCGACCA ATGA
|
|---|
| Protein sequence | MLIAGGIYAE RCRFPRWNQL YGSGLRSAVA LSSVTINVEL HAYAAEPWHN DIVATLDSFG
IARQLTQIEK GVTFDYLHPF ELAACTEPTE AAQRLEVEGQ SVLRFGLIEG DARVSGNRVV
YDPQSPKPAP FAANGSEAEN LALILTEREL FSLAGLQCDE DDRSSSLREA ITELFDTKPR
GEFLLLLKDR LGGARLYTSD DNPLRIPPVA AESYFRIGSG DVFAAAFAHA WAEEKSSPMN
AAEYAAQCVA YFVDGPRLPL PPKDRLPKAT PGMPQAGVVR LLGQGMLEFE TLLLHTADWI
VELGGKATVD LFGDFTGGTE DTTSFLILVG PRWDQDMIGR YSEITSGLPT VVYWPDAPGG
VQNILPNAHI TTDYTTALYL TLRGFDQ
|
|---|
| |