Gene Plav_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0332 
Symbol 
ID5455944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp355784 
End bp356458 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content51% 
IMG OID640875897 
ProductFRG domain-containing protein 
Protein accessionYP_001411612 
Protein GI154250788 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.820546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCC TGAAATTCAT AGATGAACGG AGTCATACGA GGTGGATATT TCGCGGATGT 
GCCTCGCGGC TGCACAAGTG CATTCCCAGT TTAGGGCGCC TGCCAAATTA CGACCTAACA
GACGAAATTA GGGTGTTTCG CGCCTTTCAG AAATCTGCAG GATTTTTTCT AACCGTGAGA
CCTACAGACG ACTGGGAATG GCTCGCCTTG GCCCAGCATC ATGGTCTCCC TACCCGACTG
CTCGACTGGA CGACCAATCC TCTAGTTGCC GCATTCTTCG CGGTATCAAC TGTCGATGCC
AAAAGCGCCA AGGATGGCTC CGTCATCTAC GCGCACAGTT TGAGCGACGA AGAGCTTGTC
GACACAAAGG TGCAAACGGA TCCATTTGAT CTGACTAGGT TGCAGTTTCT TCTACCTGCC
AAGAGTGTGC CTCGTATCAT CAGTCAAAGA GGCCTTTTTT CCGTCCACCC CGAACCGAAT
GTTCCTTGGG AGCCGGAAGC GTTCGAAAAG AACAGCTTCA CCATTCCAGA TCATCTACGT
GCACGCTTTC GGAGGCGCCT TTTTCGCCTT GGAATCGATG ACAGTCACAT TTGGGCAGAT
CTCGACGGTC TCTGTGCAAC GCTGAAGTGG CGTTATGAGG CACGGATTGG CATTGGGTCT
ACAATCATTG GATAG
 
Protein sequence
MNFLKFIDER SHTRWIFRGC ASRLHKCIPS LGRLPNYDLT DEIRVFRAFQ KSAGFFLTVR 
PTDDWEWLAL AQHHGLPTRL LDWTTNPLVA AFFAVSTVDA KSAKDGSVIY AHSLSDEELV
DTKVQTDPFD LTRLQFLLPA KSVPRIISQR GLFSVHPEPN VPWEPEAFEK NSFTIPDHLR
ARFRRRLFRL GIDDSHIWAD LDGLCATLKW RYEARIGIGS TIIG