Gene Plav_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0328 
Symbol 
ID5456033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp353321 
End bp354028 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content52% 
IMG OID640875893 
Producthypothetical protein 
Protein accessionYP_001411608 
Protein GI154250784 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTGC CCGAGAAGAT AGCGGCGATG CATGCCGATC TTGATTCGAT TTGGCCCACC 
GGTCGCAATC CTGAGTGCCT GCCAAATGAT GGCGGACACT TTACGCTTAA GGGATACACT
CGACCCGTTT CAATTGGGCG CATTGAAGCG TTTCTTCTGT TCAATCTGGT TCGAGTGCTG
AACATTCGCA CAGCTTTCGA GATCGGGACC GGCTTCGGCT ATTCCAGCTT CTGGATTGCT
GCTGGCGTGA TCGAGAACGA CAAAGGGGGA TGGGTCGGAA GCATTGACAG TCAGCAAGAA
GGTGGACTTG GGGTACATGG TCTCGATTTC GCCAGACGAT GGTCAAACAT CATCGGGTTG
GATTCGGTTC TGCATTTCTT TACTGGCAAG TCCCCCGATG ACCTTTCTCA CGTTATTCGA
GAGCCACTGG GCCTTGCGTT CATTGATGGC AATCACTACG GAGAGCAACC TGTACTAGAC
TACACGGGAT TGCAGCCTCA TCTTTTGCAA GATGGAATTT TAGTTTGGCA CGACATTGAA
AAGAAATACG GGGTTAATGC CGCGATAGCC GCGTCCATCA AAGATGGTTG GTCTCTAGTG
ACATTTCCAA CCAGCTGCAG GATAGGCGTC TCCTATCGCA CCCTGGCCGG ATGGCAGGCG
GCAACCGAAG CGTTTTCGGC GGCAAGAAAC CTCCAAATTA TCCACTAG
 
Protein sequence
MELPEKIAAM HADLDSIWPT GRNPECLPND GGHFTLKGYT RPVSIGRIEA FLLFNLVRVL 
NIRTAFEIGT GFGYSSFWIA AGVIENDKGG WVGSIDSQQE GGLGVHGLDF ARRWSNIIGL
DSVLHFFTGK SPDDLSHVIR EPLGLAFIDG NHYGEQPVLD YTGLQPHLLQ DGILVWHDIE
KKYGVNAAIA ASIKDGWSLV TFPTSCRIGV SYRTLAGWQA ATEAFSAARN LQIIH