Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0328 |
Symbol | |
ID | 5456033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 353321 |
End bp | 354028 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640875893 |
Product | hypothetical protein |
Protein accession | YP_001411608 |
Protein GI | 154250784 |
COG category | [R] General function prediction only |
COG ID | [COG4122] Predicted O-methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCTGC CCGAGAAGAT AGCGGCGATG CATGCCGATC TTGATTCGAT TTGGCCCACC GGTCGCAATC CTGAGTGCCT GCCAAATGAT GGCGGACACT TTACGCTTAA GGGATACACT CGACCCGTTT CAATTGGGCG CATTGAAGCG TTTCTTCTGT TCAATCTGGT TCGAGTGCTG AACATTCGCA CAGCTTTCGA GATCGGGACC GGCTTCGGCT ATTCCAGCTT CTGGATTGCT GCTGGCGTGA TCGAGAACGA CAAAGGGGGA TGGGTCGGAA GCATTGACAG TCAGCAAGAA GGTGGACTTG GGGTACATGG TCTCGATTTC GCCAGACGAT GGTCAAACAT CATCGGGTTG GATTCGGTTC TGCATTTCTT TACTGGCAAG TCCCCCGATG ACCTTTCTCA CGTTATTCGA GAGCCACTGG GCCTTGCGTT CATTGATGGC AATCACTACG GAGAGCAACC TGTACTAGAC TACACGGGAT TGCAGCCTCA TCTTTTGCAA GATGGAATTT TAGTTTGGCA CGACATTGAA AAGAAATACG GGGTTAATGC CGCGATAGCC GCGTCCATCA AAGATGGTTG GTCTCTAGTG ACATTTCCAA CCAGCTGCAG GATAGGCGTC TCCTATCGCA CCCTGGCCGG ATGGCAGGCG GCAACCGAAG CGTTTTCGGC GGCAAGAAAC CTCCAAATTA TCCACTAG
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Protein sequence | MELPEKIAAM HADLDSIWPT GRNPECLPND GGHFTLKGYT RPVSIGRIEA FLLFNLVRVL NIRTAFEIGT GFGYSSFWIA AGVIENDKGG WVGSIDSQQE GGLGVHGLDF ARRWSNIIGL DSVLHFFTGK SPDDLSHVIR EPLGLAFIDG NHYGEQPVLD YTGLQPHLLQ DGILVWHDIE KKYGVNAAIA ASIKDGWSLV TFPTSCRIGV SYRTLAGWQA ATEAFSAARN LQIIH
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