| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0307 |
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| Symbol | |
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| ID | 5454040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 329931 |
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| End bp | 331742 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640875871 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001411587 |
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| Protein GI | 154250763 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGTCAC TTGATCTCGG AATAATCGGA AACGGCACTT ATGGTGCCCT CATCGACAAA
TGGGCCCGCA TCGTCTGGTG CTGCCTTCCG CGGCTGGACG GCGATCCGGT CTTCTACGAT
CTCCTGAACA AGGGCCCGGA CGGCAGCGAA CCTCCAGACG AGAACGCCCC GGACCAGGGC
TTCTGGTCGA TCGAAATCGA AAACGCCGCC TCCTCGCGCC AGTTCTATCG CCCGAACACG
GCAATCCTCG TTACCGAACT GACAGACCGC GACGGCAATG CCATCGAGAT ATGCGATTTT
TCGCCTCGCT TCACCCGGCG GGAACGTATC TTCCAGCCGA TGACCCTTGT GCGCCGTGTC
CGCCCGCTGG CCGGTTCGCC CCGCATCCGC ATCAGGCTCC GGCCCGGCTT CAACTACGGT
GCCCAGGCGC CAAGCATCAC GCGCGGCAGC CATCATGTGC GCTTCTTTCA CAGCGGCTTC
GCCCTGCGCC TGTCGACCAA CGCGCCTCTC ACTTATCTGC TCGACGAAAC CATCTTCAAT
CTGACCAACC CCTTGAGCTT CATCATGGGC CCGGACGAGA CGCTGACCGG CGGCGTGGAG
GAAACCGCAC GCGAATTCGA GGAGCGAACG GAGGACTATT GGAGGAGATG GGTACGCCGT
CTTGCCCTGC CGCTCGAATG GCAACAGGCC GTCATCCGCG CCGCCATTAC TCTCAAGCTC
TGCTGCTACG AGGAAACCGG CGCCATAGTC GCGGCACTGA CGACCAGCAT TCCCGAAATG
GCGGATAGCG AACGAAACTG GGACTACCGC TTCTGCTGGC TGCGCGACGC CTTTTTCGTG
ATCCGGGCGC TCAACTCGCT GGCCGAGGTC GAGACGATGG AAAATTACCT TCGTTATCTC
GGCAACATTG TTGGCTCGGC GGAGGAAGGC CATCTCCAGC CCGTCTATGG CATCGGCCTC
GAAACCCGCC TCGACGAGCA TATTGTCGAA ACGCTTCCGG GCTACCGGGG CATGGGCCCT
GTCCGGCGCG GCAACCAGGC CTATGAGCAC TTCCAGCACG ACGTCTATGG CAATGTGATC
CTCGCGGCGT CGCAATCCTT TTTCGACGAG CGGCTGCTGC AACGCGCCAC CATGGCCGAC
TTTGAACGCT ACGAGAAAGT AGGCGAGCGG GCCTATGCGA TGCATGCGGA GCCGGATGCC
GGCATGTGGG AGCTGCGGAC CCGCGCCCGC GTCCACACAT CATCAAGTGT CATGTGCTGG
GCGGCCTGCG ACCGGCTTGC CCGGATTGCC GAGCATCTCG GCCTGATGGA ACGCGCCCGG
CACTGGCGGA GGCTCGCCGA CGAGATTCAC GCAACCATCT GTAAACGCGC CTGGAACGAG
GAACTGGGCG CGTTTACGGA AAGCTTTGAA GGCGACCAGT TCGATGCCGG GCTCTTGCTG
ATGGCGGAAG TCAACTTCAT CCGGCCATCC GATCCACGCT TCCAGTCGAC CCTGCTGGCC
ATCGAGAAGT CGCTCCGCCG GGGGCAGCAC ATGTTCCGTT ATGCGACCGC TGACGATTTT
GGGGTGCCCG GGAACGCATT CAATATTTGC ACGTTTTGGT ACATAGACGC CCTCGCCCGA
GTCGGCAGGA CGGATGAAGC AAGAGAGATT TTCGAGTCAA TCCTGGCGTG CCGCAATAGT
TTGGGTTTGC TCTCCGAAGA TATCGATCCG GCCACCGGCG AGCTTTGGGG AAACTATCCG
CAAACCTATT CCCTTGTCGG CATCATAAAC GCAGCGATGC GTTTGAGCCG TAAATGGGAA
GATCAGGTAT GA
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| Protein sequence | MSSLDLGIIG NGTYGALIDK WARIVWCCLP RLDGDPVFYD LLNKGPDGSE PPDENAPDQG
FWSIEIENAA SSRQFYRPNT AILVTELTDR DGNAIEICDF SPRFTRRERI FQPMTLVRRV
RPLAGSPRIR IRLRPGFNYG AQAPSITRGS HHVRFFHSGF ALRLSTNAPL TYLLDETIFN
LTNPLSFIMG PDETLTGGVE ETAREFEERT EDYWRRWVRR LALPLEWQQA VIRAAITLKL
CCYEETGAIV AALTTSIPEM ADSERNWDYR FCWLRDAFFV IRALNSLAEV ETMENYLRYL
GNIVGSAEEG HLQPVYGIGL ETRLDEHIVE TLPGYRGMGP VRRGNQAYEH FQHDVYGNVI
LAASQSFFDE RLLQRATMAD FERYEKVGER AYAMHAEPDA GMWELRTRAR VHTSSSVMCW
AACDRLARIA EHLGLMERAR HWRRLADEIH ATICKRAWNE ELGAFTESFE GDQFDAGLLL
MAEVNFIRPS DPRFQSTLLA IEKSLRRGQH MFRYATADDF GVPGNAFNIC TFWYIDALAR
VGRTDEAREI FESILACRNS LGLLSEDIDP ATGELWGNYP QTYSLVGIIN AAMRLSRKWE
DQV
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