Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0299 |
Symbol | |
ID | 5455074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 321781 |
End bp | 323610 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640875863 |
Product | 60 kDa inner membrane insertion protein |
Protein accession | YP_001411579 |
Protein GI | 154250755 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0706] Preprotein translocase subunit YidC |
TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGACA ACCGCAACTT CATCATCGCC ATCTTCCTGT CGGTCCTCGT CTTTATCGGC TGGCAGTATT TCTTCATCGA ACCGCAGATG GAGGCGGAGC GCGCCAGGCA GGAGCAGCTT GCGGCCGATA ACGGAACGGC GGAGCCGGCA CCCGGCGCCG CACCTTCCGC TCCCGGCGAT GCGCGTCTCC CCAGCGTCGA TGCCCCGGCA ACACGCGCGC CCGGCGTTGC AGCTTCCGGC GCGGTTGCCC GCGACGAAGC CCTGGCCCAG AGCGCGCGCG TTCCGATCCT TTCCGAAGAA CTTCAGGGAT CGGTTTCGCT GCGCGGCGCG CGTTTCGACG ACCTGAAACT TCTCAAATAC AATGTGACCG TCGACCCGGA GAGCCCGGAA GTCGAACTCT TCTCGCCGGT GCGGACCGAG CGGCCCTATT TTTCCGAGTT CGGTTTCATC GCCGCCCCCG GCGCCAATAT CAACCTGCCG ACATCGGCCA CCGAATGGGA GCTCGAAGCG GGCGACCGGC TGACGCCGCA GACGCCGGTG ACGCTGCGCT GGGACAATGG CCAGGGCCTC GTCTTCCACC GCGAGATCGC GCTCGACGAG CATTTCCTCT TCACCGTCAC CGACCGGATC GAGAATCTTT CGGCCAACGA AGTGACGCTC TATCCCTACG GCCTCATCTC GCGCACCGGG CGCCCGGCGG GCAGCTCCTT CTTCATTCTG CATGAAGGCT TCATCGGCGA GTTTCCGAGC GTCGGCGAAA AGGCGATCAC CTATGACGAT GCCGAGGAAG ACGATCCCGT ACAGGTAACG GACACCGAAG GCTGGCTCGG CATCACCGAC AAATACTGGG CCGCAGCCCT TGTGCCGCAA TCGGGCCTGA ACTTCGTCGC GAATTTCAGC GAGCATCCCG ATCCCGCGAT CGTGAACTAC CAGGCCGATT TCCGTTATGG CGCACAGACC GTGCCGGCCG GCGGAAGCAT CACGCTCAAC AACCGGCTTT TCGCGGGCGC AAAGGTCAGC ACCGTCATCG ACAGCTACCG CGACGCCGGT ATCTACAAGT TCAGCCTGCT GATCGACTGG GGCTGGTTCT GGTTCCTGAC GCAGCCGATG TTCGACGCGC TGCACTTCAT TGCGCTGCAT GTCGGCAATT TCGGCATCGC CATTCTCGTC ATCACCGTGC TCATCAAGCT CGTCTTCTAT CCGCTCGCCA ACAAGTCCTA TGTGGCCATG AGCAAGATGA AGAAGCTGCA GCCGGAAATG GAAAAGCTGC GCGAGCGCTA CAAGGACGAC AAGTTGAAGC AGCAGCAGGA GATCATGGAG CTCTACAAGA AGGAGAAGGT GAACCCGCTT GCCGGCTGCC TTCCCGTCCT GATCCAGATC CCCGTCTTCT TCGCGCTCTA CAAGGTTCTG TTCGTCACCA TCGAAATGCG CCACGCGCCT TTCTTCGGCT GGATCAACGA TCTTTCCGCG CCGGACCCGA CCTCGATCTT CAACCTGTTC GGACTGATCC CGTGGGATCC GCCCTCGATG CTGATGATCG GCATCTGGCC GCTCATCATG GGCTTCACCA TGTTCGTGCA GCAGCGCATG AACCCGCTGC CGGCCGATCC GATCCAGGCA CAGATTTTCA CCTGGATGCC GGTCATCTTC ACTTTCATGC TGGCGAGCTT CCCAGCCGGT CTCGTGATCT ACTGGGCGTG GAACAACACG CTGTCGGTGA TCCAGCAGGG CGTCATCATG AAGCGGCAGG GTGTGAAGAT CGAAATCTTC TCCAATCTCG GTCTCGAAAA GCTCGCCGGT GTCTTCTCCG GCAACAAGCC GAAATCCTGA
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Protein sequence | MGDNRNFIIA IFLSVLVFIG WQYFFIEPQM EAERARQEQL AADNGTAEPA PGAAPSAPGD ARLPSVDAPA TRAPGVAASG AVARDEALAQ SARVPILSEE LQGSVSLRGA RFDDLKLLKY NVTVDPESPE VELFSPVRTE RPYFSEFGFI AAPGANINLP TSATEWELEA GDRLTPQTPV TLRWDNGQGL VFHREIALDE HFLFTVTDRI ENLSANEVTL YPYGLISRTG RPAGSSFFIL HEGFIGEFPS VGEKAITYDD AEEDDPVQVT DTEGWLGITD KYWAAALVPQ SGLNFVANFS EHPDPAIVNY QADFRYGAQT VPAGGSITLN NRLFAGAKVS TVIDSYRDAG IYKFSLLIDW GWFWFLTQPM FDALHFIALH VGNFGIAILV ITVLIKLVFY PLANKSYVAM SKMKKLQPEM EKLRERYKDD KLKQQQEIME LYKKEKVNPL AGCLPVLIQI PVFFALYKVL FVTIEMRHAP FFGWINDLSA PDPTSIFNLF GLIPWDPPSM LMIGIWPLIM GFTMFVQQRM NPLPADPIQA QIFTWMPVIF TFMLASFPAG LVIYWAWNNT LSVIQQGVIM KRQGVKIEIF SNLGLEKLAG VFSGNKPKS
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