Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0286 |
Symbol | |
ID | 5453391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 305607 |
End bp | 306377 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640875850 |
Product | prephenate dehydratase |
Protein accession | YP_001411566 |
Protein GI | 154250742 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.936099 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCATT TGCCCCGCCT TCTCGCCCTT TCGGCCCTCG CCCTCCTTCT CGGCCTCGTC CCGGCGGCGG CGGACACGCT CGCCCGCATC GAGGCCGCGG GCACGCTCCG GGTCGGCCTC ACCGGCGACT ACAAGCCCTT CTCCTGGGAG GCGCCCCAAG GCCATTTCGA AGGCCTCGAT GTGGACATGG CCCGGGCGCT CGCGGACAGC CTCGGCCTCC GCCTCGAAAT CGTCCCCACA AGCTGGCCCG GCCTGATGGA CGACCTCGCC GCCGAAAAAT TCGACATCGG CATGGGCGGC ATCTCCGTCA CGGAGGAGCG GCGGACCACC GCCTTCTTCT CCACGCCCCT CCTCACCGAC GGCAAGACGC CCATCGCCCG CTGCGAAGAC GCCGCCCGCT TCCAGACCCT GGATCAGATC GACCGCGAAG GCGTGACGCT GATCGTCAAT CCCGGCGGCA CCAACGAAAA ATTCACCCGC GCGAACATCA AGACGGCGGC GATCATCCTC CACAAGGACA ATGCGACCAT CTTCGAGGAA ATCGCCGAAG GCCGCGCCGA CCTGATGATC ACCGACGCCA TCGAAACGCG GATCATGGCG AAGGAGCATC CCGCGCTTTG CGCGATCCAT CCCGACGAGC CCTTCGACCG TTCGGAGAAG GCTTACCTGC TACCACAGGA CGAAGCCTGG AAAGCGCGCG TGGATGAATG GCTCGCAGCG ATGGAGGCGA GCGGAGAGAA GGCAACAATT TTCGGGAAGT GGGTGGAGTA G
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Protein sequence | MRHLPRLLAL SALALLLGLV PAAADTLARI EAAGTLRVGL TGDYKPFSWE APQGHFEGLD VDMARALADS LGLRLEIVPT SWPGLMDDLA AEKFDIGMGG ISVTEERRTT AFFSTPLLTD GKTPIARCED AARFQTLDQI DREGVTLIVN PGGTNEKFTR ANIKTAAIIL HKDNATIFEE IAEGRADLMI TDAIETRIMA KEHPALCAIH PDEPFDRSEK AYLLPQDEAW KARVDEWLAA MEASGEKATI FGKWVE
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