| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0282 |
|---|
| Symbol | |
|---|
| ID | 5453366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 303378 |
|---|
| End bp | 303851 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640875846 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001411562 |
|---|
| Protein GI | 154250738 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.486948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAA GACAGCCCGG CGTGTTGATG GCGCAATTGC TCAACCGCTT CATGTGGTTC
GACGGCGCCT TGCAGAAGAA CCTCGATGCG CGCGGCCATG GCGGCGTGCG CCGGCTCGAA
TCCATGACCA TGGTCTATGT CCATGCGGGC GTGCGCCGCC CGAGCGAACT GGCGCGGCTG
CTCGGCGTCA CGCGGCAATC GATGAACACG GCGCTGCGCG AGCTGGAGGA AAAGCGGCTT
GTCTATATGA CGCCGGACCC CGAGGATGCG CGCTGCAAGC TCGTGACCTT CGCGCCGGAG
GGCGCGGGCG TGAGGGCGGA GGCGCTGGAA ATCGTCAGCG GCCTCGAAGC GGAACTCGAA
GCGCGGCTCG GCGCGAGGAC GGTGGAGAAC CTGGCACGCA TCGTGAGCGC GGAATGGGGC
GAGGCGCCGG TGATGGCGAA GCCGGTACAG GGAAGAAAGA AGAAAAAAGC ATGA
|
|---|
| Protein sequence | MTQRQPGVLM AQLLNRFMWF DGALQKNLDA RGHGGVRRLE SMTMVYVHAG VRRPSELARL
LGVTRQSMNT ALRELEEKRL VYMTPDPEDA RCKLVTFAPE GAGVRAEALE IVSGLEAELE
ARLGARTVEN LARIVSAEWG EAPVMAKPVQ GRKKKKA
|
|---|
| |