| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0272 |
|---|
| Symbol | |
|---|
| ID | 5454602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 292958 |
|---|
| End bp | 293632 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640875836 |
|---|
| Product | OmpA/MotB domain-containing protein |
|---|
| Protein accession | YP_001411552 |
|---|
| Protein GI | 154250728 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATGA AAAAATTTGC CGCTCTCGCG CTCGCCGCGA GCTTCGGCCT CGCTGCCTGC
CAGACACAGG ATGCCTATAC GGGCGAACAG AAGACGAGCA AGGCGACCTA TGGCGCGCTT
GGCGGCGCCG TGATCGGTGC GCTTGGCGGC GCGCTTATCG GCGGCGGCGA TTCAACCGAC
CGGCGCCAGC GGGCGATGAT CGGTGCGGGT ATCGGCGCTC TGGCCGGCGG CGGCGTCGGC
TACTACATGG ACAAGCAGGA AGCCGAACTG ACACAGCGCC TGCGCGCGTC GGGCGTCAGC
GTCACCCGCG TCGGCAACGA CATCATCCTC AACATGCCGG GCAACGTCAC CTTCGCCACC
AATTCCTCCG ACATCAACGC GAAGTTCTAC GACGTGCTGA ATTCGGTCGC GATCGTGCTG
AAGGAATACG ACAAGACGCT GATCGACGTG ACGGGCCACA CGGACTCGAC GGGCTCCGAC
CAGTACAATC TCGAACTGTC GCAGAAGCGC GCGCAGAGCG TGGCCTCCTA TCTGATCGGC
CAAAGCGTGG ACAGCCGCCG CTTCTATATC GTCGGCGCGG GCGAGAGCCA GCCGATCGCG
ACGAACGACA CGCCGCAGGG CCGCGAGCAG AATCGCCGCG TGGAAATCCG CCTGTCGCCG
CTGACGACGA GCTGA
|
|---|
| Protein sequence | MLMKKFAALA LAASFGLAAC QTQDAYTGEQ KTSKATYGAL GGAVIGALGG ALIGGGDSTD
RRQRAMIGAG IGALAGGGVG YYMDKQEAEL TQRLRASGVS VTRVGNDIIL NMPGNVTFAT
NSSDINAKFY DVLNSVAIVL KEYDKTLIDV TGHTDSTGSD QYNLELSQKR AQSVASYLIG
QSVDSRRFYI VGAGESQPIA TNDTPQGREQ NRRVEIRLSP LTTS
|
|---|
| |