| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0268 |
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| Symbol | |
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| ID | 5454275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 289073 |
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| End bp | 290365 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640875832 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001411548 |
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| Protein GI | 154250724 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCGC CGATCAAACA TCTCGCCGCA ACTATGCTTT ATGCGCTGCC TTCGGTCGCG
CTGGCCTGGG GGGCCACTGC GCTGTTCGGC TTCGATCCGA AGCTGGCGGC GTTGGGCGGT
CTCATCGCCT GCCTGCTCGG CGCGGAAGCC CATGCCGCCA TATCGCGCAG CGTCGAGCGC
AAGGCCGTCC GCAAGGAATT GCAGGAATTG ACGAGCCTCG CGGCCGGGTT GTCGCGGGAT
CTCGACGATG CGGCGGACAA GATCGTCGAA CTGGAAGAGC GCTTCGAGCG CGAAACCGCC
GAACGCATGG AGCGCATCTT CTCCGAAATC CGCGTGGTCG AAAGCCTCGT GAAACGCCTC
GCCGAGACCC GCGAATTCTC CGGCGCCGTC GTTGCCGCCG CGCAACCACC CGCAATCGAA
GCCTCGAAAC CCGCGCTCGA ACTTGCCTCG CCCGCGCCGG ACAGCGACGT ACCGCCGCCG
AAGCCGGAAA AGCGGCTTGA GGAAATGAAC GATTCCGAAT TGCTGGAAAC GATCCGCCGT
TCGCTCGAAA CGAACCGCGT CGATCTCTAT CTGCAGCCGG TGGTCAGCCT GCCGCAGCGC
AAGGTGATGT ATTACGAGGG CCTGTCGCGT CTTCGCACCG ACAAGGGCGA ACTCATCATG
CCGCGCGACT ACATGCGCGT GGCCGAGCCC GCCGGCATGA TGCCGACGGT CGACAATATC
CTGCTCTTCC GCTGCATCCA GGTGGTGCGC AAGCTCGCCC AGCGCAACAG CAAGGCGGGC
GTCTTCTGCA ACATCTCCGC CTTCTCGCTG CTGGACGAGG ATTTCTTCCC GCAGTTCATC
GACTACATGC AGCACAACAC CGATCTTGCG CAGCACCTCA TCTTCGAATT CAGCCAGATG
ACGGTGAACG GCGCAGGCCC CGTGGAGCGC GCAAGCCTCG AAGCGCTCGC CGCGCTTGGC
TTCCGTTTCT CGATGGATCA GGTGACCAAT CTGCGCTTCG ACGTGGCGGC GCTGCACGAC
CGGAACTTCC GCTACGTGAA AGTCTCCGCC GCGACGATGC TCGAAGGCCG CCATACGGCC
GGCGACATTC ATGCCGGGGA TCTCAAGGAA TTGCTGCGCC GGAGCGGCAT CCAGCTCATC
GTCGACAAGG TGGAGACGGA GCGCGAGGTC GTGGACGTGC TCGACCTCGA TGTCGAGCTC
GGACAGGGCT ATCTCTTCGG CGAGCCGCGC CCCGTGCGGG AAAGCGTGCT GCGCGAGGAG
CCCCAGCCCG GCATTTCCAT CGCGGCGGAT TGA
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| Protein sequence | MPSPIKHLAA TMLYALPSVA LAWGATALFG FDPKLAALGG LIACLLGAEA HAAISRSVER
KAVRKELQEL TSLAAGLSRD LDDAADKIVE LEERFERETA ERMERIFSEI RVVESLVKRL
AETREFSGAV VAAAQPPAIE ASKPALELAS PAPDSDVPPP KPEKRLEEMN DSELLETIRR
SLETNRVDLY LQPVVSLPQR KVMYYEGLSR LRTDKGELIM PRDYMRVAEP AGMMPTVDNI
LLFRCIQVVR KLAQRNSKAG VFCNISAFSL LDEDFFPQFI DYMQHNTDLA QHLIFEFSQM
TVNGAGPVER ASLEALAALG FRFSMDQVTN LRFDVAALHD RNFRYVKVSA ATMLEGRHTA
GDIHAGDLKE LLRRSGIQLI VDKVETEREV VDVLDLDVEL GQGYLFGEPR PVRESVLREE
PQPGISIAAD
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