| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0267 |
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| Symbol | |
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| ID | 5456245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 288126 |
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| End bp | 288971 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640875831 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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| Protein accession | YP_001411547 |
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| Protein GI | 154250723 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTTT CCGACCTGAA GCCCGTCATC GAGCGCGCCT TCGAAAATCG CGATCAGATC
AATGCCCAGA CGAAGGGCGA GGTGCGGGAC GCCGTGAACG AGGCCCTGAA CGCGCTGGAC
AGCGGCAAGG CGCGGGTTGC CGAAAAGTTT CAAGGCTCCT GGGAAGTGCA TCAGTGGCTG
AAGATGGCCG TGCTGCTTTC CTTCCGTCTC AACGACATGT CCACCATCGC GGGCGGACCC
GGCGAAAACA CCAATTGGTG GGACAAGGTG CCGTCGAAGT TCGAAGGCTG GGGCGAGGCC
GAGTTCCGCA AGGCGGGCTT CCGGGCCGTG CCGGGCGCCA TTGTCCGCCG CTCGGCCTAT
ATCGCGCCGA ACGTTGTGCT CATGCCTTCC TTCGTCAATC TCGGCGCCCA TGTGGACGAG
GGGACGATGG TCGACACCTG GGTCACCGTC GGCTCCTGCG CCCAGATCGG GAAGAACTGC
CATTTGTCAG GCGGTGTCGG CATTGGCGGC GTGCTTGAGC CGCTGCAGGC GAACCCCGTC
ATCATCGAGG ACAATTGCTT CATCGGCGCC CGCTCGGAAG TCGTGGAAGG CGTGATCGTC
GGCGAAGGCG CCGTGCTTTC CATGGGCGTC TTCATCTCGG CCTCGACCAA GATCATCGAC
CGGGCGACCG GCGAGGTCCA TATCGGCAAG GTGCCGCCTT ATTCGGTCGT CGTGCCGGGG
TCGCTGCCGG GCAAGGCAAA CCCCGACGGC TCGCCCGCAC CCAGCCTTTA TTGCTGCGTG
ATCGTGAAGA CGGTGGATGC GCAGACCCGC GCCAAAACCG CCATCAACGA GTTGCTGCGC
GACTGA
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| Protein sequence | MSLSDLKPVI ERAFENRDQI NAQTKGEVRD AVNEALNALD SGKARVAEKF QGSWEVHQWL
KMAVLLSFRL NDMSTIAGGP GENTNWWDKV PSKFEGWGEA EFRKAGFRAV PGAIVRRSAY
IAPNVVLMPS FVNLGAHVDE GTMVDTWVTV GSCAQIGKNC HLSGGVGIGG VLEPLQANPV
IIEDNCFIGA RSEVVEGVIV GEGAVLSMGV FISASTKIID RATGEVHIGK VPPYSVVVPG
SLPGKANPDG SPAPSLYCCV IVKTVDAQTR AKTAINELLR D
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