| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0263 |
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| Symbol | |
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| ID | 5454733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 284715 |
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| End bp | 285455 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640875827 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001411543 |
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| Protein GI | 154250719 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCT ACAAACTCAC CATCGAATAT GACGGCTCAC CCTTTGTCGG CTGGCAGGCG
CAGACGAATG GCCGCTCCGT CCAGCAGGTG CTGGAGGAAG GTATCAAGGG CTTTTGCGGC
CAGGAACTGA AAATCTTTGG CGCGGGGCGT ACCGATGCGG GCGTCCATGC GCTGGGGCAG
GTTGCCCATG TCGATTTCGA GACCCCCGTT GCACCGGACA CGCTGCGCGA CGCGGTGAAC
GCCCATATGC GCCCGCACCC CGTCGCCATT GTCGAAGCGG AAGAAGTACC GGACAGCTTC
GAGGCGCGCT TCTCCGCGGT GAAGCGGCAC TACATGTATC GCATCGTCAA TCGCCGCGCG
CCGCTGACGC TCGATCGCGG CCAGGCATGG CTTGTCCACA AGACGCTCGA CGCCGACGCA
ATGCATGACG CGGCGCAGGC GCTGGTCGGC AATCATGATT TCACGACCTT CCGCTCGGTG
CAGTGTCAGG CGAAATCGCC GGTGAAGACC GTCGACGAGA TTTCGGTATC GCGCTATGCG
GATGAAATCG AGATCGTCTG CCGCGCCCGC AGCTTCCTCC ACAATCAGGT GCGCTCCTTC
GTCGGCACGC TGAAAATGGT CGGCGATGGA AGCTGGACGA GGCGCAAGGT GGAAAAAGCG
CTGGCCGCAA AGGACCGCGC CGCCTGCGGC CCTGTCGCGC CGCCGGACGG GCTTTATCTC
TTGCAGGTCG ATTACGAGTA G
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| Protein sequence | MPRYKLTIEY DGSPFVGWQA QTNGRSVQQV LEEGIKGFCG QELKIFGAGR TDAGVHALGQ
VAHVDFETPV APDTLRDAVN AHMRPHPVAI VEAEEVPDSF EARFSAVKRH YMYRIVNRRA
PLTLDRGQAW LVHKTLDADA MHDAAQALVG NHDFTTFRSV QCQAKSPVKT VDEISVSRYA
DEIEIVCRAR SFLHNQVRSF VGTLKMVGDG SWTRRKVEKA LAAKDRAACG PVAPPDGLYL
LQVDYE
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