| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0251 |
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| Symbol | |
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| ID | 5455077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 273044 |
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| End bp | 273820 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640875814 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_001411531 |
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| Protein GI | 154250707 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.241609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATC TCGCGCAGCC GGCAGCAAAG GAGCTCGCCG GGCACCCCTT GGTGGTGATT
CCCGCCCGCA TGGCCTCGAC GCGTCTGCCC GGAAAGCCGC TGGCCGATAT TTGCGGGACG
CCAATGATCG TCCAGGTCTG GCGTCGCGCG ATGGAGGCCG GAGTGGGGCG GGTGGTGGTG
GCCGCCGCCG AAAAGGAAAT CGCCGATGCC GTCCGTGAAG CCGGTGGTGA GGCAGTGCTG
ACCGATCCCG ACCTCCCCTC CGGCTCGGAC CGTGTCTGGC AAGCCGTGTG TGAAGTCGAT
CCGGAAGGGC ACCATACCGT CATCCTGAAT GTGCAGGGCG ATCTGCCGAC GCTGGACCCG
GCTCTCATCC GGACCGCCTA TGAAGCGCTT GTTCGTCCGG GTGCCGACAT TTCGACGCTC
GCCGCGACCA TTACGGTGGA GGAAGAGCGC ACCAATCCCA ATGTCGTGAA GGCGGTGGCG
TCGTTCGGCG AGGGTCGCCT CGCGCGCGCG CTCTACTTCA CGCGGGCCAC GGCTCCATGG
GGCGAGGGGC CACTCTATCA TCACATCGGG CTTTACGGTT ACAGGCGCGA GGCGCTCGCC
CGGTTTGTCG CCTTGCCGCC ATCGCCGCTT GAAGTTCGTG AGAAGCTTGA ACAATTGCGT
GCCCTGGAAG CGGGCATGGC CATTGAGGTT GCTCTCGTTG ACACTGTTCC TCTCGGTGTC
GATACTCCCG CCGACCTTGA AAAAGCCCGC GCGGCGCTTG CCCGGAGATC CGTCTGA
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| Protein sequence | MANLAQPAAK ELAGHPLVVI PARMASTRLP GKPLADICGT PMIVQVWRRA MEAGVGRVVV
AAAEKEIADA VREAGGEAVL TDPDLPSGSD RVWQAVCEVD PEGHHTVILN VQGDLPTLDP
ALIRTAYEAL VRPGADISTL AATITVEEER TNPNVVKAVA SFGEGRLARA LYFTRATAPW
GEGPLYHHIG LYGYRREALA RFVALPPSPL EVREKLEQLR ALEAGMAIEV ALVDTVPLGV
DTPADLEKAR AALARRSV
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