Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0247 |
Symbol | |
ID | 5456157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 266869 |
End bp | 267978 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640875810 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001411527 |
Protein GI | 154250703 |
COG category | [R] General function prediction only |
COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCT ATATCATCCG CCGCCTGCTG CTCATGATCC CGACTATTTT CGGCATCATG CTTGTCAGTT TTATCCTCGT GCAGTTTGCA CCCGGTGGTC CCATTGAGCG GATCGTTGCA CAGCTTCAGG GTACCGATGT CTCTGCGACC GCACGTATCG GCGGCTCCGG CGGCGGCGAC TTCGGCGCGC AAGGGCAGAT GTCCGGAGCA GACAGCTCCA TCAACAGCAA ATATCGCGGT GCCCAAGGGC TGGATCCCGA GTTTATCAAA TCGCTTGAGG TGCAGTTTGG GTTCGACAAA CCGGCCCACG AGCGGTTCGC CAAAATGATC TGGGATTATG CCCGCTTCGA CTTCGGGCAA AGCTATTTCC GCGACGTGAG CGTTCTCAGC CTCGTGCTGG AGAAGATGCC GGTGTCGATT ACTCTCGGGC TTTGGACAAC GCTACTCACT TATCTCATTT CGATCCCACT TGGGATCCGC AAGGCAATTC GCGACGGGAC CCGGTTCGAT ACATGGACGA GCGGCATCAT CATCGTCGGC TATGCGGTGC CCGGCTTTTT GTTCGCGGTG TTTCTGATCG TTCTTTTCTC CGGGGGCTCC TACTGGTCGA TCTTTCCCTT GCGCGGTCTC ACATCCGACA ACTGGGAAAG CCTGAGCCTC GCCGGAAAGG CGCTCGATTA TCTTTGGCAT GTCGTTCTGC CGGTGACCGC GCTGGTTATC GGCTCGTTCG CGACAACAAC ACTGCTGACA AAGAATTCCT TTCTGGATGA AATCAAGAAG CAATATGTGA TGACCGCGCG TGCCAAAGGG CTGTCCGAAC ATCAGGTTTT GTATGGGCAT GTATTCCGGA ATGCCATGCT CATCATCATT GCCGGTTTTC CCGGCGCCTT TGTCGGCGCG TTCTTCACGG GGTCACTCCT CATAGAACAA ATTTTTTCGT TGGATGGGCT TGGTCTTCTG TCATTTGAAT CCATCGTCAA TCGCGATTAC CCGGTGGTGT TCGCCACGCT TTATATATTC GGCCTACTCG GCCTCGCGAT GACGCTCATC AGCGATCTCA CATATACTTG GGTCGACCCG CGCATCGACT TTGAAACAAG GGAGGCCTAA
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Protein sequence | MSAYIIRRLL LMIPTIFGIM LVSFILVQFA PGGPIERIVA QLQGTDVSAT ARIGGSGGGD FGAQGQMSGA DSSINSKYRG AQGLDPEFIK SLEVQFGFDK PAHERFAKMI WDYARFDFGQ SYFRDVSVLS LVLEKMPVSI TLGLWTTLLT YLISIPLGIR KAIRDGTRFD TWTSGIIIVG YAVPGFLFAV FLIVLFSGGS YWSIFPLRGL TSDNWESLSL AGKALDYLWH VVLPVTALVI GSFATTTLLT KNSFLDEIKK QYVMTARAKG LSEHQVLYGH VFRNAMLIII AGFPGAFVGA FFTGSLLIEQ IFSLDGLGLL SFESIVNRDY PVVFATLYIF GLLGLAMTLI SDLTYTWVDP RIDFETREA
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