Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0245 |
Symbol | |
ID | 5454567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 264173 |
End bp | 265801 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640875808 |
Product | ABC transporter related |
Protein accession | YP_001411525 |
Protein GI | 154250701 |
COG category | [R] General function prediction only |
COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGC CGCTGGTAGA AGTGAAAAAT CTCTCTGTCG GCTTCCGCAT GGACGGCCAA GAAACGATTG CCGTAAACCG CATATCGTTC GACATCAAGC ATGGTGAAAC CGTAGCGCTG GTCGGTGAAT CCGGATCGGG GAAATCCGTT TCCGCGCTAT CGATCATGCA GCTCCTGTCC TATCCGCAAG CCTTTCATCC AAATGGCGAA ATCTTCTTTG GCGGACAAAA TCTCATTGGA GCCGACGAAA AGACCATGCG CCGCATCCGC GGCAACAAGA TAACCATGGT TTTTCAGGAG CCTCTTACCT CCCTCAATCC ACTCCATACA ATCGAACGGC AGGTTGGCGA GGTGTTGAGT GAGCACAAAG GGATGCGCGG TCCTGCCGTG CGCGCGCGCG TACTCGACCT GTTGCGGAAA GTCGGCATCC CCAATGCGGA GGAAAGACTC GACGCCTATC CGCATCAGCT GTCGGGCGGA CAACGCCAGC GCGTCATCAT CGCCATGGCG CTTGCCAATG AGCCGGACCT GCTGATCGCC GACGAGCCGA CAACGGCACT CGACGTTACG GTTCAGGCAC AGATTCTTGA GCTGCTGAAG GATTTGAAAC GCGAGATGGG GATGGCGCTA CTTCTCATCA CGCACGATCT CGGCATTGTC AGGAAGATGG CAGACCGCGT CTTCGTCATG ACCAAGGGTG AGATCGTGGA GCGCGGGCCG ACGGAACAGA TATTCACCAC ACCCAAGCAT CCCTACACGC AGCACCTCCT TGCCTCAGAA CCGAAAGGAC GCTCTCTCGG CGCGCCGAAG GACGGCCCTG TCGTCATGGA AGCCGAAAAT CTGAAGGTCT GGTTTCCGAT CAGACGCGGT CTGCTCCGGC GTACGGTAGG ACATATAAAG GCTGTCGACG ACGTCTCACT TACCCTGCGC GAGGGCCGGA CGCTCGGCGT TGTTGGAGAA TCCGGATCGG GCAAGACAAC TTTGGGCCTC GCACTCATGC GGTTGCTTTC AAGTGAAGGC GACATTCGCT TCAATGCAAA ATCCATTCAG GGGCTGAAAT CCAAAGAGCT AAGGCCGCTT CGCCGGGATA TGCAGATCGT CTTCCAAGAT CCCTTTGGCT CGCTCAGTCC GCGCATGTCC GTCTCGGATA TTGTGAGCGA GGGCCTCCGC ATTCAGCAAC CGGGGCTCGC GGCAGCCGAG CTGCGAATGC ATGTGTCTGA AGCTCTTGGC GAAGTTGGCC TCGACCCGGA AATGCAGGAC CGGTATCCGC ACGAATTTTC CGGTGGCCAG CGACAGCGCA TTGCCATTGC GCGCGCGATG GCACTAAAGC CGCGTTTTGT AATGCTCGAC GAGCCTACCA GTGCCCTGGA CATGTCCGTG CAGGCCCAAA TCGTCGACCT TCTGCGCGAT CTGCAGAGGC GGTATAATCT CGCCTATCTC TTCATCAGCC ACGATTTGAA GGTGGTGAGA GCGCTTGCGG ACGACATCAT CGTCATGCGG GGGGGCAAAG TTGTAGAGAC GGGGACGGCC GATCAGGTTT TCGATGCGCC GAAAACCGAA TACACCAAGG CGTTGATGGC GGCGGCATTC GATCTTGCCG TCACGCCGGC AGGGGCCGTT TCCGAGTAG
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Protein sequence | MSAPLVEVKN LSVGFRMDGQ ETIAVNRISF DIKHGETVAL VGESGSGKSV SALSIMQLLS YPQAFHPNGE IFFGGQNLIG ADEKTMRRIR GNKITMVFQE PLTSLNPLHT IERQVGEVLS EHKGMRGPAV RARVLDLLRK VGIPNAEERL DAYPHQLSGG QRQRVIIAMA LANEPDLLIA DEPTTALDVT VQAQILELLK DLKREMGMAL LLITHDLGIV RKMADRVFVM TKGEIVERGP TEQIFTTPKH PYTQHLLASE PKGRSLGAPK DGPVVMEAEN LKVWFPIRRG LLRRTVGHIK AVDDVSLTLR EGRTLGVVGE SGSGKTTLGL ALMRLLSSEG DIRFNAKSIQ GLKSKELRPL RRDMQIVFQD PFGSLSPRMS VSDIVSEGLR IQQPGLAAAE LRMHVSEALG EVGLDPEMQD RYPHEFSGGQ RQRIAIARAM ALKPRFVMLD EPTSALDMSV QAQIVDLLRD LQRRYNLAYL FISHDLKVVR ALADDIIVMR GGKVVETGTA DQVFDAPKTE YTKALMAAAF DLAVTPAGAV SE
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