Gene Plav_0245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0245 
Symbol 
ID5454567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp264173 
End bp265801 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content58% 
IMG OID640875808 
ProductABC transporter related 
Protein accessionYP_001411525 
Protein GI154250701 
COG category[R] General function prediction only 
COG ID[COG4172] ABC-type uncharacterized transport system, duplicated ATPase component 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC CGCTGGTAGA AGTGAAAAAT CTCTCTGTCG GCTTCCGCAT GGACGGCCAA 
GAAACGATTG CCGTAAACCG CATATCGTTC GACATCAAGC ATGGTGAAAC CGTAGCGCTG
GTCGGTGAAT CCGGATCGGG GAAATCCGTT TCCGCGCTAT CGATCATGCA GCTCCTGTCC
TATCCGCAAG CCTTTCATCC AAATGGCGAA ATCTTCTTTG GCGGACAAAA TCTCATTGGA
GCCGACGAAA AGACCATGCG CCGCATCCGC GGCAACAAGA TAACCATGGT TTTTCAGGAG
CCTCTTACCT CCCTCAATCC ACTCCATACA ATCGAACGGC AGGTTGGCGA GGTGTTGAGT
GAGCACAAAG GGATGCGCGG TCCTGCCGTG CGCGCGCGCG TACTCGACCT GTTGCGGAAA
GTCGGCATCC CCAATGCGGA GGAAAGACTC GACGCCTATC CGCATCAGCT GTCGGGCGGA
CAACGCCAGC GCGTCATCAT CGCCATGGCG CTTGCCAATG AGCCGGACCT GCTGATCGCC
GACGAGCCGA CAACGGCACT CGACGTTACG GTTCAGGCAC AGATTCTTGA GCTGCTGAAG
GATTTGAAAC GCGAGATGGG GATGGCGCTA CTTCTCATCA CGCACGATCT CGGCATTGTC
AGGAAGATGG CAGACCGCGT CTTCGTCATG ACCAAGGGTG AGATCGTGGA GCGCGGGCCG
ACGGAACAGA TATTCACCAC ACCCAAGCAT CCCTACACGC AGCACCTCCT TGCCTCAGAA
CCGAAAGGAC GCTCTCTCGG CGCGCCGAAG GACGGCCCTG TCGTCATGGA AGCCGAAAAT
CTGAAGGTCT GGTTTCCGAT CAGACGCGGT CTGCTCCGGC GTACGGTAGG ACATATAAAG
GCTGTCGACG ACGTCTCACT TACCCTGCGC GAGGGCCGGA CGCTCGGCGT TGTTGGAGAA
TCCGGATCGG GCAAGACAAC TTTGGGCCTC GCACTCATGC GGTTGCTTTC AAGTGAAGGC
GACATTCGCT TCAATGCAAA ATCCATTCAG GGGCTGAAAT CCAAAGAGCT AAGGCCGCTT
CGCCGGGATA TGCAGATCGT CTTCCAAGAT CCCTTTGGCT CGCTCAGTCC GCGCATGTCC
GTCTCGGATA TTGTGAGCGA GGGCCTCCGC ATTCAGCAAC CGGGGCTCGC GGCAGCCGAG
CTGCGAATGC ATGTGTCTGA AGCTCTTGGC GAAGTTGGCC TCGACCCGGA AATGCAGGAC
CGGTATCCGC ACGAATTTTC CGGTGGCCAG CGACAGCGCA TTGCCATTGC GCGCGCGATG
GCACTAAAGC CGCGTTTTGT AATGCTCGAC GAGCCTACCA GTGCCCTGGA CATGTCCGTG
CAGGCCCAAA TCGTCGACCT TCTGCGCGAT CTGCAGAGGC GGTATAATCT CGCCTATCTC
TTCATCAGCC ACGATTTGAA GGTGGTGAGA GCGCTTGCGG ACGACATCAT CGTCATGCGG
GGGGGCAAAG TTGTAGAGAC GGGGACGGCC GATCAGGTTT TCGATGCGCC GAAAACCGAA
TACACCAAGG CGTTGATGGC GGCGGCATTC GATCTTGCCG TCACGCCGGC AGGGGCCGTT
TCCGAGTAG
 
Protein sequence
MSAPLVEVKN LSVGFRMDGQ ETIAVNRISF DIKHGETVAL VGESGSGKSV SALSIMQLLS 
YPQAFHPNGE IFFGGQNLIG ADEKTMRRIR GNKITMVFQE PLTSLNPLHT IERQVGEVLS
EHKGMRGPAV RARVLDLLRK VGIPNAEERL DAYPHQLSGG QRQRVIIAMA LANEPDLLIA
DEPTTALDVT VQAQILELLK DLKREMGMAL LLITHDLGIV RKMADRVFVM TKGEIVERGP
TEQIFTTPKH PYTQHLLASE PKGRSLGAPK DGPVVMEAEN LKVWFPIRRG LLRRTVGHIK
AVDDVSLTLR EGRTLGVVGE SGSGKTTLGL ALMRLLSSEG DIRFNAKSIQ GLKSKELRPL
RRDMQIVFQD PFGSLSPRMS VSDIVSEGLR IQQPGLAAAE LRMHVSEALG EVGLDPEMQD
RYPHEFSGGQ RQRIAIARAM ALKPRFVMLD EPTSALDMSV QAQIVDLLRD LQRRYNLAYL
FISHDLKVVR ALADDIIVMR GGKVVETGTA DQVFDAPKTE YTKALMAAAF DLAVTPAGAV
SE