Gene Plav_0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0243 
Symbol 
ID5454688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp262935 
End bp263306 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content60% 
IMG OID640875806 
ProductMarR family transcriptional regulator 
Protein accessionYP_001411523 
Protein GI154250699 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGAC TATCTCTGAC AGGGGCCGTA GAGCTGAAGC CGGTTCAGGC TCTTTCGCTG 
TGGCACAATG TCGTGCTTCA GTCCGTTCGC AGGGACGGAC CGGACCTATC TTCAAGGCAA
CTCGCCATCA TGTTCATCGT CTATCTCGAT CCGCCGCCCC ACACTGTTCG CGGTCTTGCG
GCTTCGCTGG GCGTGTCGAA GCCTGCTGTC ACACGCGCAC TCGACACCTT GGGCGGTCTT
GATCTTCTGA AGCGGACGCG CGACGAGGCC GACCGGCGCA ATGTGTTGGT GCAGCGAACC
GTAAAGGGGT CGGCCTTCAT GCATGATTTC GCCGACCTCA TCGTCAACTC GTCGAGAGGC
CTTCAGGCAT GA
 
Protein sequence
MPGLSLTGAV ELKPVQALSL WHNVVLQSVR RDGPDLSSRQ LAIMFIVYLD PPPHTVRGLA 
ASLGVSKPAV TRALDTLGGL DLLKRTRDEA DRRNVLVQRT VKGSAFMHDF ADLIVNSSRG
LQA