| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0232 |
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| Symbol | |
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| ID | 5453818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 250575 |
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| End bp | 251327 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640875795 |
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| Product | SAF domain-containing protein |
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| Protein accession | YP_001411512 |
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| Protein GI | 154250688 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCCCG TACGTATAGG AGTTCTGGTT CTGGCGCTCG TTGCCGCAGG TCTCGCGGCA
CTTCTCGCGC GCGGCCTCGT GTCGGGCAAT GATGAACCCG TCGAACAGAA GGTCGTCGAG
GCGCCAACTA CAGAAGTGCT CGTGGCCAGC AGCAATCTGC AGCTCGGCCA ACGTATTGGC
GGCGGCGACC TGCGCTGGCA GCGCTGGCCT GACACCTCGC TGAACGGAGC TTATATCACT
CGCAATCAGA GCCCCGCCGC GCTCGAGGAA TACACGGGCA GCGTCGCCCG CGCGAGCCTT
CTCAGCGGGG AGCCGGTGAC CTCTGAAAAA CTCGTTACAC TGACGGGCGC CGGCTTCATG
TCGGCCTTGA TCGAGCCCGG GATGCGCGCG ACCGCGATCA GCATCACGCC GGAAACCAGC
GCCGGCGGCT TCATCCTGCC CAATGACCGG GTGGACATCG TTGATCTCGC GAAAGGTCAA
ACGATTTTGC GCAACATTCG AGTTCTCGCG ATCGATCAGC GCTTTGACGA AAAGGCCGGA
GAACAGGTTG CGGTCGGCAG GACAGCGACG CTTGAGCTGA CGCCTGCTCA GGTCGAAGTG
GTATCCGTCG CCGAAGCGGA AGGCCGGATC GGCCTCTCGC TTCGCAGCAT GGCGGAGCAG
GACCTTGCCG GCAGTGAGAA GACCGTGGCC GAGGGCGGCT CGGTTGTGAA AGTTGTGCGC
TACGGAACCG CGCAGAACGT GCGTGTGAAG TAA
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| Protein sequence | MNPVRIGVLV LALVAAGLAA LLARGLVSGN DEPVEQKVVE APTTEVLVAS SNLQLGQRIG
GGDLRWQRWP DTSLNGAYIT RNQSPAALEE YTGSVARASL LSGEPVTSEK LVTLTGAGFM
SALIEPGMRA TAISITPETS AGGFILPNDR VDIVDLAKGQ TILRNIRVLA IDQRFDEKAG
EQVAVGRTAT LELTPAQVEV VSVAEAEGRI GLSLRSMAEQ DLAGSEKTVA EGGSVVKVVR
YGTAQNVRVK
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