Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0232 |
Symbol | |
ID | 5453818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 250575 |
End bp | 251327 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640875795 |
Product | SAF domain-containing protein |
Protein accession | YP_001411512 |
Protein GI | 154250688 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCCCG TACGTATAGG AGTTCTGGTT CTGGCGCTCG TTGCCGCAGG TCTCGCGGCA CTTCTCGCGC GCGGCCTCGT GTCGGGCAAT GATGAACCCG TCGAACAGAA GGTCGTCGAG GCGCCAACTA CAGAAGTGCT CGTGGCCAGC AGCAATCTGC AGCTCGGCCA ACGTATTGGC GGCGGCGACC TGCGCTGGCA GCGCTGGCCT GACACCTCGC TGAACGGAGC TTATATCACT CGCAATCAGA GCCCCGCCGC GCTCGAGGAA TACACGGGCA GCGTCGCCCG CGCGAGCCTT CTCAGCGGGG AGCCGGTGAC CTCTGAAAAA CTCGTTACAC TGACGGGCGC CGGCTTCATG TCGGCCTTGA TCGAGCCCGG GATGCGCGCG ACCGCGATCA GCATCACGCC GGAAACCAGC GCCGGCGGCT TCATCCTGCC CAATGACCGG GTGGACATCG TTGATCTCGC GAAAGGTCAA ACGATTTTGC GCAACATTCG AGTTCTCGCG ATCGATCAGC GCTTTGACGA AAAGGCCGGA GAACAGGTTG CGGTCGGCAG GACAGCGACG CTTGAGCTGA CGCCTGCTCA GGTCGAAGTG GTATCCGTCG CCGAAGCGGA AGGCCGGATC GGCCTCTCGC TTCGCAGCAT GGCGGAGCAG GACCTTGCCG GCAGTGAGAA GACCGTGGCC GAGGGCGGCT CGGTTGTGAA AGTTGTGCGC TACGGAACCG CGCAGAACGT GCGTGTGAAG TAA
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Protein sequence | MNPVRIGVLV LALVAAGLAA LLARGLVSGN DEPVEQKVVE APTTEVLVAS SNLQLGQRIG GGDLRWQRWP DTSLNGAYIT RNQSPAALEE YTGSVARASL LSGEPVTSEK LVTLTGAGFM SALIEPGMRA TAISITPETS AGGFILPNDR VDIVDLAKGQ TILRNIRVLA IDQRFDEKAG EQVAVGRTAT LELTPAQVEV VSVAEAEGRI GLSLRSMAEQ DLAGSEKTVA EGGSVVKVVR YGTAQNVRVK
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