| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0202 |
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| Symbol | |
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| ID | 5454115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 225795 |
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| End bp | 226670 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640875764 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001411482 |
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| Protein GI | 154250658 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGCA AACGGCTTTT CTGTTTCGGT ATGGGTTTCA GCGCGCGGGT CTTTGCCAGC
CGCCTTGCCG GACGCGGCTT TGCTGTGGCG GGCACTTGCA GGAGCGAAGA GAAGGCGGCG
CGGCTCCGCG AGGCGGGCAT CGAGGCTTTT CTTTTCGACA GCGGCTTGCC GCTGCGGGAC
GCGGAGCAGG CGCTTGACGG CACCACGCAT CTGCTGATCT CGACGCCGCC AGCGGAAGCG
GGCGACCCGG TGCTGGCCGC GCATCGCGAC GCGCTTCGCC GGCTCGCACC CCGGATCGAA
TGGGCGGGCT ATCTTTCGAC CACCGGCGTC TATGGCGACC GGCAGGGCGG CTGGGTGACG
GAGGAGACGC CGCTCGACCC GGCCGTGGCG AGGAGCGACA GGCGGGCGAG CGCGGAAGCC
GGCTGGCAGG CCTTCGCGCG CGAGACCGGG CTGCCGCTCC ATATATTCCG GCTGGCCGGC
ATATACGGGC CGGGACGCAA CCAGCTTCAA GGCGTGATCG ACGGCACGGC GAAGCGGATC
GTGAAGGAAG GGCAGATTTT CTCGCGCATT CATGTGGAGG ATATTGCGGG CGTGCTCGAA
GCCTCGATGG CAAAGAAGCG GCCGGGCGCG ATCTACAATG TCTGCGACGA CGAACCCGCC
CCCGCGCATG AAGTTGTGGC CTATGCGGCG GAACTGCTTG GCCGCGAGCC GCCGCTGGAA
GTGCCTTATG AGACGGCTGA TCTTTCGCCG ATGGCGCGGA GCTTCTATGC CGCCTCGCGC
CGCGTTTCCA ATGTGCGTCT TCACGAGGAA TTGGGCTATG ATCTGCGCTA TCCGACCTAT
CGCGAGGGCT TGAAGGCGCT GCTCGGTACG CTGTGA
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| Protein sequence | MSGKRLFCFG MGFSARVFAS RLAGRGFAVA GTCRSEEKAA RLREAGIEAF LFDSGLPLRD
AEQALDGTTH LLISTPPAEA GDPVLAAHRD ALRRLAPRIE WAGYLSTTGV YGDRQGGWVT
EETPLDPAVA RSDRRASAEA GWQAFARETG LPLHIFRLAG IYGPGRNQLQ GVIDGTAKRI
VKEGQIFSRI HVEDIAGVLE ASMAKKRPGA IYNVCDDEPA PAHEVVAYAA ELLGREPPLE
VPYETADLSP MARSFYAASR RVSNVRLHEE LGYDLRYPTY REGLKALLGT L
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