Gene Plav_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0200 
Symbol 
ID5455133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp223846 
End bp224997 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content65% 
IMG OID640875762 
Producthypothetical protein 
Protein accessionYP_001411480 
Protein GI154250656 
COG category[C] Energy production and conversion 
COG ID[COG1600] Uncharacterized Fe-S protein 
TIGRFAM ID[TIGR00276] iron-sulfur cluster binding protein, putative 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATCT CGATTTCTGA TCGCGCGAAA GACCTGAACG CATTGCGCGG CGAGCTTCTC 
GCCCGCGCGA AGGAGGCGGG CTTCGACGAT GTCGGCATCG CGCGCGCCGA TGCGAGGGGC
GATCTGCCGG CGCGGCTCGA TGAGTGGCTG GTGGAGGGCC GCCACGGCAA CATGGACTGG
ATGGCCGAGA CGGCGGCACG GCGCGCGGCG CCCGCGACGC TCTGGCCGGA AGCGAAATCC
GTCATCATGC TGGCGATGAA TTACGGGCCG GACACCGACC CGCTGGAAAT TCTCGGCCAT
CGCGACCGGG CGGCGATCTC CGTTTACGCG CAGAACCGCG ACTATCACGA CCTCGTCAAG
AAGCGGCTGA AACAGGTGGC GCGCTGGCTC GCCAAAACGA GCGGCGCCGA GGTGAAGGTC
TTCGTCGATA CGGCACCCGT GATGGAGAAG CCGCTGGCGG AAGCGGCCGG GCTCGGCTGG
CAGGGCAAGC ACACGAACCT CGTCTCGCGC ACCCTCGGCT CGTGGTTCTT TCTCGGCTCG
ATCTTCACCA CGCTCGATTT CGAAGCCGAC AAACGGCATG ACGACCGCTG CGGCGAGTGC
CGCCGCTGTC TCGATGCCTG TCCGACGAAA GCCTTTCCCG CGCCTTACGA ACTCGATGCG
CGGCGCTGCA TTTCCTATCT CACCATCGAG CACAAGGGAC ACATCGCGCG CGAGTTCCGT
GAGCCGATGG GCAACCGCAT CTATGGCTGC GACGATTGTC TCGCCGTCTG CCCCTGGAAC
AAATTCGCGA ACCGCGCGCG CGAGGAAGCG TTTCATCCGC GCGATGAATT GCGCGCGCCG
CTGCTTTCGG ACCTCGCGCG GCTGGACGAT GCCGCGTTCC GCGCTTTCTT TTCGGGCTCG
CCTGTGAAAC GGATCGGCCG CGATCGTTTT GTGAGGAATG TGCTGATCGC CATCGGCAAT
TCCGGCGATC CGTCGCTTGT GCCCGTGACG ACGGCGCTGC TCGAGGATGC CTCGCCGCTT
GTCCGCGCGA TGGCGGTATG GGCGCTGGCG CAGCTTGGGC AGGGAGATAT TCTGCGCGCC
CGCGCAGAGA CGGCGCTGCA AGCGGAAGCC GACGAGGCGG TGCGCGAGGA GTGGCGCTAT
TCCTTGAGAT AA
 
Protein sequence
MPISISDRAK DLNALRGELL ARAKEAGFDD VGIARADARG DLPARLDEWL VEGRHGNMDW 
MAETAARRAA PATLWPEAKS VIMLAMNYGP DTDPLEILGH RDRAAISVYA QNRDYHDLVK
KRLKQVARWL AKTSGAEVKV FVDTAPVMEK PLAEAAGLGW QGKHTNLVSR TLGSWFFLGS
IFTTLDFEAD KRHDDRCGEC RRCLDACPTK AFPAPYELDA RRCISYLTIE HKGHIAREFR
EPMGNRIYGC DDCLAVCPWN KFANRAREEA FHPRDELRAP LLSDLARLDD AAFRAFFSGS
PVKRIGRDRF VRNVLIAIGN SGDPSLVPVT TALLEDASPL VRAMAVWALA QLGQGDILRA
RAETALQAEA DEAVREEWRY SLR