Gene Plav_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0188 
Symbol 
ID5453625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp214551 
End bp214997 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content63% 
IMG OID640875749 
Productheat shock protein Hsp20 
Protein accessionYP_001411468 
Protein GI154250644 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.822794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.424528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGAA CGATGCAGTT CAACAGCCCT TTTCTCCTGG GCTTCGATCA GATGGAGCGG 
CTGCTCGAAC GAGTGGCCAA GGCGTCGGAC GGATACCCGC CCTACAATGT CGAACAGGTT
TCGACGGAGG CGGGCGACCA GCTCCGGATC ACGCTGGCGG TGGCCGGTTT CTCCCGCGAC
GAACTCGCCG TCACGGTGGA GAACAACCAG CTCGTCATCC GCGGAAGGCA GCGCGACGAC
TCCGACCGCA CCTATCTCCA TCGCGGCATT GCCGCACGGC AGTTCCAGCG CTCGTTCGTT
CTGGCGGACG GGATCGAAGT GAAGGGCGCG ATGCTTGAGA ACGGCCTCCT GATGGTCGAT
CTCGAAAAGC CCGAACCGAG CCGGACAGTG CGAACCATCG AGATTTCCGA AGCCGCATCC
GAGCCGCTGT CCCGCAGCGC GGATTGA
 
Protein sequence
MTRTMQFNSP FLLGFDQMER LLERVAKASD GYPPYNVEQV STEAGDQLRI TLAVAGFSRD 
ELAVTVENNQ LVIRGRQRDD SDRTYLHRGI AARQFQRSFV LADGIEVKGA MLENGLLMVD
LEKPEPSRTV RTIEISEAAS EPLSRSAD