| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0184 |
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| Symbol | |
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| ID | 5453869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 210225 |
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| End bp | 211028 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640875745 |
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| Product | TonB family protein |
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| Protein accession | YP_001411464 |
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| Protein GI | 154250640 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.140188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGA CCGCCACCGC CAACGGACGC ATGACAGACG AGAGCGACGG TTCCTCCGTT
CTCGTCTGGA ACCATCGTGC GCTCCGCCGG CCGGTGGCGG TTTCCCTTCT TCTGCACGCG
GCCATCTTCA CGGGTGCGCT TGCATGGTGG CAGGGCGAAG GCGCCCCGGC ACCGAAAGGA
CATCCAGACG GTTTTTCCGT CACGCTGGTC AATTTCTCCG AGCCCGCGCC AAAAGCGCCG
CAGATACAGG CAAAGCCTGT CGTCGCGCCC GCGCAGCCGG AAGTGAAACC CCAACCGAAA
CCGGTGGTGA AGCCGGCCGT GGTCGAACGG AAAGTCGAAC CCGAGCCGCA GATCACGCCC
GACGTCACGC CCGAAATCAG CGCCGCCGCG GCAGAGCCGC TACAGGCAGC CGAAGCCGCC
GCGCAACCGG TGCAAACGGC CTCCCTCGCG CCGTCCGTCA GCGATGGCCG CGGCCAGGGC
GCCGCCAAGG GATTTGAAGA CACGCAAGGC CGCGAAAGCG ACAAAGTCTT TCTCACCGAG
CCGCGTTTCC GCTCGCCGCC GCGCCCGCCG GTCTATCCGC GCCGGGCGCG CGATCTCGAG
CAGGAAGGCG AGGCGCTGAT CCGCGTCCGG CTCGATCCGA GCGGCAATGC CGCCGAAGTG
CTGGTCTGGA AAAGCTCCGG CTTCGCGCTT CTCGACAAGG CCGCCCTCAC CGCCGTTCGC
GGCTGGCAAT TCGAACCCGC GCGGCGCGGC GGCAAGCCCG TCGTCGCCTG GGTTCAGATC
CCTGTACGTT TCGCTCTCAA CTGA
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| Protein sequence | MSMTATANGR MTDESDGSSV LVWNHRALRR PVAVSLLLHA AIFTGALAWW QGEGAPAPKG
HPDGFSVTLV NFSEPAPKAP QIQAKPVVAP AQPEVKPQPK PVVKPAVVER KVEPEPQITP
DVTPEISAAA AEPLQAAEAA AQPVQTASLA PSVSDGRGQG AAKGFEDTQG RESDKVFLTE
PRFRSPPRPP VYPRRARDLE QEGEALIRVR LDPSGNAAEV LVWKSSGFAL LDKAALTAVR
GWQFEPARRG GKPVVAWVQI PVRFALN
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