| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0178 |
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| Symbol | |
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| ID | 5454848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 204154 |
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| End bp | 205194 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640875739 |
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| Product | ABC transporter related |
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| Protein accession | YP_001411458 |
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| Protein GI | 154250634 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.360514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGG CGTTTCGAAA CGTCGGACAC AGTTTCGGCG ACCATCGGGT GTTGTCCGGC
GTTTCGCTTG AAGCGCGGCA AGGAGAAATC CTGTGCCTGC TCGGCCCCTC CGGCAGCGGC
AAGACGACAT TGCTGCGGCT CGCGGCAGGC CTCGAGGCAT TGCAGGAAGG CAGCATCGAT
CTCGGCGGCG CGTTGCTCGC GGCGCCCGGG CGCGACGTGC CGCCGGAGAA GCGGTCGTTC
GGCATGGTCT TCCAGGACCA TGCCTTGTTC CCCCACCTGA CGGTCGCGGA GAATGTCGCC
TTCGGTCTTG CAGGAAGGCC AAAGGAGCAG GCGCGCCAAG TGGTCGCGGA GCGGCTCGCC
TCTGTCGGGC TGGCAGGGTT CGAGGATCGT TACCCGCATA CGCTTTCAGG CGGTCAGCAG
CAGCGCGTGG CGCTTGCCCG CGCGCTTGCG CCGTCACCCG CCGCCATGCT GCTCGACGAG
CCGTTTGCGA GCGTCGATGT CACACGCAGG CGGGCGCTGC GCGAGGAAGC GCGCCGCGCG
TTGAAAGCGG CTGGCGTCAT TACACTTGTC GTCACGCATG ATCCGGTCGA AGCGATGGAA
ATTGCCGACC GTATCGCCGT GATGGAGAAG GGCCGCATCG CCCAATGCGC GACGCCGGAA
GAACTCTATG CGCGGCCTGC GAGCGCGCTT GTCGCATCGC TGTTCGGTGA GGCGCAACGC
TTTCCGGCAA CGGTGTTCAA GGGCGAAGCG GTGACGGCCT ATGGTCCGGT GCCGGCGGAA
AATTTCGCCG ATGGAACGGC GGTTGAAGTG ATCGTGCGGC CGGAGGCGGT GACGCTTGCG
GCGGCGGAGA GCGGCCAGGA AACCTTCAAC ATCGCCGACA TCCGCTTTCT CGGACGCGAC
TGGCTTGTGC TGCTGACGAA CGCACAATCG CCGATGCTCG AGCCGCTGCG CGCGCGCGTC
TCGACGCTTG AGGGGCTCGA GACCGGCGCC GCCATCGCGC TCCGCTTCGA CCCTTGCGGG
ACGTTCATTT TTGCGGCGTG A
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| Protein sequence | MALAFRNVGH SFGDHRVLSG VSLEARQGEI LCLLGPSGSG KTTLLRLAAG LEALQEGSID
LGGALLAAPG RDVPPEKRSF GMVFQDHALF PHLTVAENVA FGLAGRPKEQ ARQVVAERLA
SVGLAGFEDR YPHTLSGGQQ QRVALARALA PSPAAMLLDE PFASVDVTRR RALREEARRA
LKAAGVITLV VTHDPVEAME IADRIAVMEK GRIAQCATPE ELYARPASAL VASLFGEAQR
FPATVFKGEA VTAYGPVPAE NFADGTAVEV IVRPEAVTLA AAESGQETFN IADIRFLGRD
WLVLLTNAQS PMLEPLRARV STLEGLETGA AIALRFDPCG TFIFAA
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