| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0175 |
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| Symbol | |
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| ID | 5453688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 197992 |
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| End bp | 201132 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640875736 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001411455 |
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| Protein GI | 154250631 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.481543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCT CCGACGTCTC CGTCACCCGG CCCGTCTTCG CCGCCGTCAT CAGTCTTCTG
CTGGTCGCTT TCGGTCTCGT CGCCTTCGAC AGGCTGCCGC TTCGCGAATA TCCCGACATC
GATCCGCCGA TCGTTTCCAT CACGACAGAT TACCGCGGCG CCGCGGCTGC CGTGGTCGAA
ACGCGCATCA CGGAACGCAT CGAAGAGCGC ATCGCCGGCA TCGAAGGCAT TGCCTTCATC
CAGTCGTCGA GCCAGGACGG CCGCTCGCGC ATTACCATCG AGTTCAATCC CGGCCGGGAT
GTCGACGCGG CGGCAAACGA TATTCGCGAC CGCGTCTCCG GCATCCTCGA CGACCTGCCG
ACCGAAGCCG ACCCGCCCGA CATCCAGAAA GTGGATTCGA GCGACGACGT CATCATGTGG
CTCAACGTCG TGAGCGACCG GATGAATGTG CTGGAACTGA CGGACTACGC CGAGCGCCAC
CTTGTCGACC GCTTCTCGAC ACTGGACGGC GTTGCGCGGG TCCGGCTCAG CGGCGCGCGC
AGCTATGCCA TGCGGATATG GCTCGACCGG ACGGCGCTCG CGGCACGCGA ACTCACCGTC
GGCGATGTCG AGCAGGCGCT CAGGGCGGAA AATGTCGAGC TCCCCGCCGG CAATATCGAG
TCCACGCAGC GGCAGTTCAC GGCGCGTGTC GAGCGGTCCT ACCGGACGCC GCAGGATTTC
AGCGAGATTG TGCTGGCGCA GGGCTCGGAT GGCTATCTGG TCCGCCTCGG CGATGTGGCG
CGGATCGAGC GCGCGGCGGC GGAAGAGCGT ACGTTTTTCC GCGGCAATGA AGTGCCGATG
ATCGGCCTCG GCATCATCAA GCAATCCACC GCCAACACGC TTACCGTCAC AGACGGCGCC
AAGGCCGAAG CCGAAAGGCT TGCACCGACG CTCCCCGAAG GGCTCGAGTT CAAGCAAAGC
TTCGACAGCA GCGTCTTCAT CGAAGGGGCT ATTTCGGAAG TCTACAAGAC GCTCGGCATC
GCGATCGTTC TCGTCGTCCT GACGATTTTC GTCTTTCTCG GCAGCGCGCG GGCGACCCTG
GTGCCCGCCG TCACCGTCCC CGTCTCCGTC GTCGCTACCT TCCTTGTGCT CTATATTTTC
GGATTCTCGA TCAATCTCCT GACCCTGCTG GCGCTGGTGC TTGCCATCGG CCTTGTCGTC
GATGACACGA TTGTCGTGCT GGAGAATATC TACCGGCGCA TGGAAGAAGG CGCGACGCCG
CTCGTCGCCG CCTATCGCGG CGCACGGCAG GTCGGGTTTG CCGTCATCGC AACCACGATC
GCACTCATGG CGGTATTCGT GCCGCTGACC TTCATCGAAG GCGAGGTCGG CCGGCTGTTC
TCCGAATTCG CGATCACGAT GGCCGCTGCC GTCGGCTTTT CGAGCCTTGT CGCGCTCAGT
CTTTCGCCCA TGCTCGCATC GAAAATCCTG AAGCCGACGA GCAATCACAC GAAATTCACT
ATCGTTGTGG ACAATGCGTT CGAGCGGACA AAGGCGCTAT ATGCACGCGC GCTTGAGCGG
TCGCTCATGC GCCCTCTTCC CGTCTTCGCC GCCTTTGCCG GAATGCTGCT TCTTGCTTAC
GGTCTCTTCA GCATCATTCC CTCCGAATAC GCGCCGCGCG AAGACCGGGG CACATTCTTC
GTGATGGTGA ATGCGCCGGA AGGGTCTTCC TACGCCTATA CCGAAGCCTA TATGACCGAA
ATCGAAAAGC GGCTGATGCC GCTGGTCGAG GACGGAGAGA TCAGCCGGCT TCTCGTTCGC
GCGCCGCGCT CCTTCGGCAA CACCGCATCC TTCAATGACG GCATAGCCGT GATCGTGCTC
GAGGACTGGT CGGTGCGCCG CTCGGCCTGG GATATCATGA ACGATATTCG CGCGCGCACC
GGCGATCTGC CGGGCGTCAC CGTATCGCCC GTGATGCGCG CCGGCTTTGG CGGCGGCACC
TCCAAGCCGG TGCAGTTCGT GATCGGCGGC GGCACCTATG AGGAGCTTCG CGAATGGCGC
GACATCCTGC TCTCCGCCAT AGACGAGGAC AATCCGGGCC TGATCAATAT CGATCACGAC
TACAAGGAGA CGAAGCCGCA GCTGCGCGTG GAGATCGACC GGAACAGCGC GGGCGATCTC
GGCGTGACGG TTGAAAATGT CGGACGCACG CTCGAAACGA TTTTCGGCTC GCGGCTCGTC
ACCACCTATA TCGAGGATGG CGAGGAATAT GATGTCATTC TTGAAGGCGA GCGTTCGGCT
CAGCGTACGC CGAGCGACAT GAGCAACATC TTCGTCCGTT CGGAACGCTC CGGCGACCTC
GTCCCCCTCG CCAATCTCGT CACCATCAGC GAGATGGCAG GCCCGGCGAG CCTGAACAGG
TATAACCGGG TGCGCTCCAT CACCATCGAA GCGGATCTTG AAGACGGTCT TACGCTTGGC
CAGGCTCTCG ACTATCTGGA AGGGCTGGTT CAGGAAGAGC TGCCACCCGG CGTCACCATC
GACTACAAGG GTCAGTCCCT GGACTTCGTG GATTCCGGCA GTGCGCTCGG TTTCATTTTC
ATCCTGGGCA TCGTCGTGGT CTTCCTTGTG CTCGCGGCGC AGTTTGAAAG CTTTGTGCAT
CCCGTCGTCA TCATCTCCAC GGTGCCGCTC GCGATCACGG GCGGACTGCT CGGCATCTGG
CTTACCGGCG GAACGCTCAA TCTCTACACC CAGATCGGCC TCATCATGCT GGTCGGCCTC
GCGGCCAAGA ACGGCATTCT GATCGTCGAA TTCGCAAACC AGCTTCGCGA CGAGGGGCAG
GACTTCCGGG AAGCCCTGGT CGGGGCGGCG GGCATCCGCC TGCGGCCCAT CCTCATGACC
GCGATCACCA CCGCGGCGGG CGCCATTCCG CTCATTCTCT CTTTCGGCCC CGGCGCCGAA
ACAAGGGCGG CGATCGGCGT GGTCATATTC TCCGGCATCA TTGCGACGAC CGCCTTCACG
CTCTTCGTGG TACCCGTCGC CTATCAGGCC CTTGCCCAGC GCACAGGCTC GCCGGGCGAT
ACGAAGCGGC GGCTGGAAAC CGAGATGGAC CATGTCGACA GGGGTGGGCT CCGCCCACGG
CCCATGGAGG GCGCGGAATA A
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| Protein sequence | MKLSDVSVTR PVFAAVISLL LVAFGLVAFD RLPLREYPDI DPPIVSITTD YRGAAAAVVE
TRITERIEER IAGIEGIAFI QSSSQDGRSR ITIEFNPGRD VDAAANDIRD RVSGILDDLP
TEADPPDIQK VDSSDDVIMW LNVVSDRMNV LELTDYAERH LVDRFSTLDG VARVRLSGAR
SYAMRIWLDR TALAARELTV GDVEQALRAE NVELPAGNIE STQRQFTARV ERSYRTPQDF
SEIVLAQGSD GYLVRLGDVA RIERAAAEER TFFRGNEVPM IGLGIIKQST ANTLTVTDGA
KAEAERLAPT LPEGLEFKQS FDSSVFIEGA ISEVYKTLGI AIVLVVLTIF VFLGSARATL
VPAVTVPVSV VATFLVLYIF GFSINLLTLL ALVLAIGLVV DDTIVVLENI YRRMEEGATP
LVAAYRGARQ VGFAVIATTI ALMAVFVPLT FIEGEVGRLF SEFAITMAAA VGFSSLVALS
LSPMLASKIL KPTSNHTKFT IVVDNAFERT KALYARALER SLMRPLPVFA AFAGMLLLAY
GLFSIIPSEY APREDRGTFF VMVNAPEGSS YAYTEAYMTE IEKRLMPLVE DGEISRLLVR
APRSFGNTAS FNDGIAVIVL EDWSVRRSAW DIMNDIRART GDLPGVTVSP VMRAGFGGGT
SKPVQFVIGG GTYEELREWR DILLSAIDED NPGLINIDHD YKETKPQLRV EIDRNSAGDL
GVTVENVGRT LETIFGSRLV TTYIEDGEEY DVILEGERSA QRTPSDMSNI FVRSERSGDL
VPLANLVTIS EMAGPASLNR YNRVRSITIE ADLEDGLTLG QALDYLEGLV QEELPPGVTI
DYKGQSLDFV DSGSALGFIF ILGIVVVFLV LAAQFESFVH PVVIISTVPL AITGGLLGIW
LTGGTLNLYT QIGLIMLVGL AAKNGILIVE FANQLRDEGQ DFREALVGAA GIRLRPILMT
AITTAAGAIP LILSFGPGAE TRAAIGVVIF SGIIATTAFT LFVVPVAYQA LAQRTGSPGD
TKRRLETEMD HVDRGGLRPR PMEGAE
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