| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0169 |
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| Symbol | |
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| ID | 5453692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 187742 |
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| End bp | 188599 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640875730 |
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| Product | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase |
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| Protein accession | YP_001411449 |
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| Protein GI | 154250625 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTTG TGACTTTTGA GAAAAACGGC ACCGCGAGGC TCGGACTGGC TGAAGGCTTG
GAGGTTGCCG ATCTCTCCGG TTCAGATAGC ACCCCGGCAT CGCTTCTCGC GCTTCTCGCT
GCGGGCGATG AGGGATTAGC TGCCGCACGA AAGGCCGCGA TTTCCGCCCC GCGATACCCG
CTCGACGAGT TGAAACTTCT TCCAGTCTTG CCAAGGCCGG GAAAGATTAT CTGTCTCGGC
CTTAACTACG CGGCCCACGC TGCGGAGGGC GGACGTGAGA AGCCGGATTA TCCGAATTTT
TTCATGCGCT GCGCGACGTC GCTGCTCGGA CATCAAATAC CGATTGTCCG GCCCCGTGTC
TCAACCCAGC TCGATTTCGA GGCGGAACTC GCCGCCATCA TCGGCCGCGA GGTGCCGCGT
CATGTGGCGA GAGAAGAGGC GCTGACCTTT GTCGCAGGCT ATGCATGCTT TAATGACGTA
TCCGTGCGCG ACTACCAGCG CCGGACACCG CAATGGACGA TCGGAAAGAA CTTCGATGCC
ACCGGCCCCT TCGGGCCGGC TTTTGTGACG GCGGATGAAT TGCCGGCGGG CGCAGCTGGG
CTGAAGATCG AGTCCCGGCT CAATGGCGAA GTAATGCAGA GCGCAAATAC CCGCGACATG
ATCTTTCCGG TAGACGAAAC AATCGCGCTT CTCAGCGAGT GCATGACACT TGAGGTTGGA
GACGTCCTTG TCATGGGAAC GCCGGCAGGG GTGGGGTTTG CAAGGACGCC GCCGCTCTGG
ATGAAAGAGG GCGACACGAT CGAGGTCGAG ATCGAGGGTG TTGGCCTGCT CTCGAACCCG
ATCGTGAACG AAATCTAA
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| Protein sequence | MRLVTFEKNG TARLGLAEGL EVADLSGSDS TPASLLALLA AGDEGLAAAR KAAISAPRYP
LDELKLLPVL PRPGKIICLG LNYAAHAAEG GREKPDYPNF FMRCATSLLG HQIPIVRPRV
STQLDFEAEL AAIIGREVPR HVAREEALTF VAGYACFNDV SVRDYQRRTP QWTIGKNFDA
TGPFGPAFVT ADELPAGAAG LKIESRLNGE VMQSANTRDM IFPVDETIAL LSECMTLEVG
DVLVMGTPAG VGFARTPPLW MKEGDTIEVE IEGVGLLSNP IVNEI
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