| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0158 |
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| Symbol | |
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| ID | 5454088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 173099 |
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| End bp | 173929 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640875719 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001411438 |
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| Protein GI | 154250614 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGAAAC TCGAAGGAAA AGTCGCCCTC GTCTCGGGCT CTGGCCGCGG CATCGGCCGC
GCGCTGGCAG TGAAGCTCGC GTCCGAAGGT GCCCGCGTCG TCGTCAACGA CATGGACAAG
GACCCCGCCG CCGAAACCGT GGAGGCGATC CGCGCCGCCG GCGGCGAAGC CGTCGCCTGC
GTCGGCAGCG TCACGGAAGC GGATTTCGGC GACCGTTTCG TCAAGACCGC GCTCGACACA
TGGGGCGGGC TCGACATCAT CGTCAACAAT GCGGGCTACA CCTGGGACAA TGTCATCCAG
AAGATGTCGG ACGAGCAGTT CCAGGCGATG CTCGACGTCC ATCTCGCCGC GCCTTTCCGC
ATCCTGCGCG CAGCGGCGGA ACCGATCCGC GTCTTCGCCA AGAAGGAGGC ACAGGAAGGC
CGCGAAGTTT TCCGCAAGGT TGTGAATATT TCCTCCGTTG CGGGTCTCGG CGGCAACACA
GGCCAGGTTA GCTACTCCTC CGCCAAGGCC GGTCTCGTCG GCATGACGAA AACCATGTCG
AAGGAATGGG GGCGCTACAA AGTCAATGTC AACTGCGTCG CCTTCGGCTT CATCCGGACG
CGCCTCACCC AGCCGCTCAC GGGCGAGGGC GCGAGCATTG ATGTCGAGGG CCGGAAGATC
GCCGTCGGTG TCCAGCCTGC CTTCATCGAC GCGATGGAAA AGCAGATGAT CCCCATCGGC
CGTGCCGGCA CGCCGGAAGA AGCCGCCGAC GGCGTCTACC TCTTCTGCGC CCCTGAATCG
AACTACATCA GCGGTCAGGT GATCGTGGTT GGCGGCGGCG TCTCGATGTG A
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| Protein sequence | MSKLEGKVAL VSGSGRGIGR ALAVKLASEG ARVVVNDMDK DPAAETVEAI RAAGGEAVAC
VGSVTEADFG DRFVKTALDT WGGLDIIVNN AGYTWDNVIQ KMSDEQFQAM LDVHLAAPFR
ILRAAAEPIR VFAKKEAQEG REVFRKVVNI SSVAGLGGNT GQVSYSSAKA GLVGMTKTMS
KEWGRYKVNV NCVAFGFIRT RLTQPLTGEG ASIDVEGRKI AVGVQPAFID AMEKQMIPIG
RAGTPEEAAD GVYLFCAPES NYISGQVIVV GGGVSM
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