Gene Plav_0156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0156 
Symbol 
ID5454334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp172213 
End bp172656 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content63% 
IMG OID640875717 
Producthypothetical protein 
Protein accessionYP_001411436 
Protein GI154250612 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACC GCTCCTTCAT CGGCCACGAA TTCGCGCCCG TCGCGGCGGA ACTCGAGAAG 
GGCCGCCTGC GCTTCTTCGC CCGGGCGACC GGCAACACCG ACCCCGTCTA TTCCGACGAG
GCGGCGGCGC GCGCGGCGGG TTATCCCTCC CTTCCCGCGC CGCCCACCTT CCTCTTCTGC
ATGGAAATGG ACCGCGACGA TCCGATGGAT TTTCTCGGTA TGTTGAAGGT CGATCTCGGC
CGCGTGCTGC ATGGCGAGCA GAATTTCACC TACCACGCTC CCGTCTGCGC GGGCGACACC
GTCACCTTCC GCACGCGCAT CTCCGACATC TACGACAAGA AGAACGGCGC GCTCGAATTC
ATCGTCATGG ACACCGAATG CCGCAATCAG AAGGGCGTCC ATGTCGCGGA TATGCGCCGC
TCCATCGTCG TTCGAAACGG ATAA
 
Protein sequence
MIDRSFIGHE FAPVAAELEK GRLRFFARAT GNTDPVYSDE AAARAAGYPS LPAPPTFLFC 
MEMDRDDPMD FLGMLKVDLG RVLHGEQNFT YHAPVCAGDT VTFRTRISDI YDKKNGALEF
IVMDTECRNQ KGVHVADMRR SIVVRNG