Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0154 |
Symbol | |
ID | 5455243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 169440 |
End bp | 171002 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640875715 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001411434 |
Protein GI | 154250610 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTATCTCA CGCAATCCAT TCACCGCGCC GTGGCGGTGA CGTCGCGCGC CGCCGCCACG ATCTGCGGCA CCCGGACCCG CACATGGACG GAGCTGCATG ACCGTGTCTC GCGTCTCGCG GGCGCCCTGC GCGGCCTCGG TGTGGGCGCG GGCGACCGCA TCGCCCTCCT CTCCATGAAT TCGGACCGCT ATCTCGAAAC CTGTTTCGCG GCCTGGTGGG CGGATGCCGT CATCGTGCCC ATGAACACGC GCTGGTCGGT CGCCGAGCAT GTCTATTCGA TCGAGGACGC CGGCGCGGCG CTGCTGCTCA TGGACGAGAC TTTCCGCGAA GCCGGGCTCG CCGTGCGCGA CGCCTGCCCG CGGATCGCTC ATGCCGTCTA CATGGGGGAT GGCGCGGCCC CGGAGACCTG CCTTTCATAT GAAGAGCTGA TCGCCGCCGG TCCCGCAATC GGAGATGCGC GGCGCGGCGG CGAGGAGCTC GCAGGCATCT TCTACACGGG CGGCACGACA GGTTTCCCGA AAGGCGTCAT GCTCTCCCAC AAGGCGCTCT GGACAAGTTC GCTGTCGGTC GGCGCGGGCA CGGCGGGGTT CAATCCCGAT ATGCGCTATC TCCACGCGGC GCCGATGTTT CATCTCGCCG ACTTCGCCAT GTCCACCGCC ACCACGATCT ATGGCGGCTC GCATGTCTTC ATGCCCTCCT TCGAGCCCGC TTCCTTTCTG AAACTCATCG AGCAACACCG CGCCAGCTAT GCGCTGCTCG TGCCCACCAT GATCCGCATG CTGCTCGACT GCCCGGCCAT GGCGCAGCAC GATCTGTCCT CGTGGAAGGG CCTCTTCTAC GGCGCCTCTC CCATGCCCGA AGCGCTTCTG CGCGAGGCGC TGGCGAAACT TCCCGGTGTC GCCTTCACGC AAGGCTACGG GCAGACGGAG CTCGCCCCCA TCGCGACATT GCTCGGCCCG GAATTCCACG TTCTCGAAGG GCCGAACGCG GGCAAGCTCC GCTCCGCCGG GCGTCCCGGT CTCTGCGTCG AACTGCGCGT CGTCGGCCCG GACGGCAAGG AGCTCCCGCG CGGCGAAGTC GGCGAGGTCG CGGTGCGCGG TCCGAACACC ATGCTCGGCT ACTGGAACAA GCCGGAACAG ACCGCCGCGA CGCTTGTCGA CGGCTGGGTG ATGACGGGCG ACGGCGGCTA CATGGACGAG GAAGGCTTCC TCTACATCGT CGACCGCCTG AAGGACATGA TCGTCTCCGG CGGCGAGAAT GTCTTCTCGG CCGAAGTCGA GAACGCGGTC ATGCAGCACG ATGCCGTCGC CGAATGTGCC GTCATCGGCG TGCCGGATCC GAAATGGGGC GAGCGGGTGC ATGCCGTCGT CGTTCCGAAG TCCGGCCGCC ACCTCTCGGA AGAAGAACTC TTCGCGCACT GCAAGGCGCT CATCGCCGGA TACAAGTGCC CGCGCAGCGC CGACATCCGG CACGAACCGC TGCCGAAATC CGCGGCCGGA AAAATTCTGA AAACCGATCT GCGCCGTCCC TATTGGGAAG GGCAGAGCCG AAACGTCAGC TGA
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Protein sequence | MYLTQSIHRA VAVTSRAAAT ICGTRTRTWT ELHDRVSRLA GALRGLGVGA GDRIALLSMN SDRYLETCFA AWWADAVIVP MNTRWSVAEH VYSIEDAGAA LLLMDETFRE AGLAVRDACP RIAHAVYMGD GAAPETCLSY EELIAAGPAI GDARRGGEEL AGIFYTGGTT GFPKGVMLSH KALWTSSLSV GAGTAGFNPD MRYLHAAPMF HLADFAMSTA TTIYGGSHVF MPSFEPASFL KLIEQHRASY ALLVPTMIRM LLDCPAMAQH DLSSWKGLFY GASPMPEALL REALAKLPGV AFTQGYGQTE LAPIATLLGP EFHVLEGPNA GKLRSAGRPG LCVELRVVGP DGKELPRGEV GEVAVRGPNT MLGYWNKPEQ TAATLVDGWV MTGDGGYMDE EGFLYIVDRL KDMIVSGGEN VFSAEVENAV MQHDAVAECA VIGVPDPKWG ERVHAVVVPK SGRHLSEEEL FAHCKALIAG YKCPRSADIR HEPLPKSAAG KILKTDLRRP YWEGQSRNVS
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