| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0145 |
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| Symbol | |
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| ID | 5456419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 161354 |
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| End bp | 162055 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640875705 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001411425 |
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| Protein GI | 154250601 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCG AAAACCCCAT ATTCTGTGCG TTGGACACGA CCGATATCGG CCGTGCGGTG
GCGCTTGCGC GCGATCTGAA GGGGAGCGTG GGCGGCGCGA AGCTGGGCAT GGAGTTTTTC
AACGCGCACG GGCCTGAGGG TTACCGGGCT GTCGCGGAGA CCGGGCTGCC GATCTTTCTC
GATCTCAAGC TTCACGACAT CCCGAATACC GTCGCGGGAG GCATCCGCGC AGTGCTGCCG
CTGCGGCCGG CCATCGTCAA TGTCCATGCG GCAGGCGGCG CCGCGATGAT GCGCGCGGCG
GCGGATGCGG CAAGGGAGGC CGGTGATGCG CGGCCCCTCC TCATCGCCGT TACCCTGCTG
ACGAGCCTCG ATGCCTCGGA CCTTGCGGAT ACCGGCGTCA CGGGAAGCCC AAGCGACCAT
GTGCGCCGGC TGGCGGCGCT TGCTGCAGGA GCGGGGCTCG ACGGCGTGGT CTGTTCCGCA
CATGAAATTG AAGCGCTCAG GCGCGACCTG GGACCGGACT TCAAGCTCGT GGTGCCCGGT
ATCAGGCCCG AGAAGAGCGA TGTCGGCGAC CAGAAGCGCG TGATGACGCC CTCGCAGGCT
CTTGCGTCCG GAGCCGATGT ACTGGTGATC GGCCGTCCGA TCACGGGTGC CGGTGATCCG
CGAGCAGCTG CGGACGAGAT CAATCGCTCG CTCGCCGCGT GA
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| Protein sequence | MKLENPIFCA LDTTDIGRAV ALARDLKGSV GGAKLGMEFF NAHGPEGYRA VAETGLPIFL
DLKLHDIPNT VAGGIRAVLP LRPAIVNVHA AGGAAMMRAA ADAAREAGDA RPLLIAVTLL
TSLDASDLAD TGVTGSPSDH VRRLAALAAG AGLDGVVCSA HEIEALRRDL GPDFKLVVPG
IRPEKSDVGD QKRVMTPSQA LASGADVLVI GRPITGAGDP RAAADEINRS LAA
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